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    ATXN10 ataxin 10 [ Canis lupus familiaris (dog) ]

    Gene ID: 474467, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATXN10provided by VGNC
    Official Full Name
    ataxin 10provided by VGNC
    Primary source
    VGNC:VGNC:38299
    See related
    Ensembl:ENSCAFG00845010727
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN10 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (21011042..21175060, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (20199107..20362464, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (21224981..21388522, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (20730687..20894020, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (21044002..21207495, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 7B Neighboring gene uncharacterized LOC102152393 Neighboring gene basic proline-rich protein-like Neighboring gene fibulin 1 Neighboring gene RIB43A domain with coiled-coils 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      21011042..21175060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679553.1 → XP_038535481.1  ataxin-10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
      Related
      ENSCAFP00845014796.1, ENSCAFT00845018935.1
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 467
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    2. XM_038679554.1 → XP_038535482.1  ataxin-10 isoform X2

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 394
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    3. XM_038679555.1 → XP_038535483.1  ataxin-10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S1H3, A0A8I3N5N3
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 392
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      20730687..20894020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038488319.1 → XP_038344247.1  ataxin-10 isoform X1

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 467
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    2. XM_038488320.1 → XP_038344248.1  ataxin-10 isoform X2

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 394
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    3. XM_038488321.1 → XP_038344249.1  ataxin-10 isoform X3

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 392
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      21044002..21207495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038614209.1 → XP_038470137.1  ataxin-10 isoform X1

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 467
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    2. XM_038614210.1 → XP_038470138.1  ataxin-10 isoform X2

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 394
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    3. XM_038614211.1 → XP_038470139.1  ataxin-10 isoform X3

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 392
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      21224981..21388522 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038550220.1 → XP_038406148.1  ataxin-10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 467
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    2. XM_038550221.1 → XP_038406149.1  ataxin-10 isoform X2

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 394
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    3. XM_038550222.1 → XP_038406150.1  ataxin-10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S1H3, A0A8I3N5N3
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 392
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      20199107..20362464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_531697.7 → XP_531697.2  ataxin-10 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QY85, A0A8C0S1H3, A0A8C0YRB2, A0A8I3N5N3, A0A8I3NI83
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 467
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    2. XM_022424293.2 → XP_022280001.1  ataxin-10 isoform X2

      Conserved Domains (1) summary
      pfam09759
      Location:370 → 394
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

    3. XM_005625753.4 → XP_005625810.1  ataxin-10 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S1H3, A0A8I3N5N3
      Conserved Domains (1) summary
      pfam09759
      Location:370 → 392
      Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain
    Nucleotide Protein
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