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    ALKBH4 alkB homolog 4, lysine demethylase [ Canis lupus familiaris (dog) ]

    Gene ID: 608093, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ALKBH4provided by VGNC
    Official Full Name
    alkB homolog 4, lysine demethylaseprovided by VGNC
    Primary source
    VGNC:VGNC:37805
    See related
    Ensembl:ENSCAFG00845004778
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ALKBH4 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (7537419..7543537)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (9412262..9418383)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (7632708..7638829)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (7505923..7512043)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (7468991..7475108)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II subunit J Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene uncharacterized LOC102155052

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actomyosin structure organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxidative demethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein demethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in contractile ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in midbody IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-ketoglutarate-dependent dioxygenase alkB homolog 4
    Names
    alkB, alkylation repair homolog 4
    XP_022275308.1
    XP_038333856.1
    XP_038333857.1
    XP_038395104.1
    XP_038395105.1
    XP_038459189.1
    XP_038459190.1
    XP_038523889.1
    XP_038523890.1
    XP_850090.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      7537419..7543537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667961.1 → XP_038523889.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLU7, A0A8C0QLF4, A0A8I3RSA2
      Related
      ENSCAFP00845006762.1, ENSCAFT00845008566.1

    2. XM_038667962.1 → XP_038523890.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      7505923..7512043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038477928.1 → XP_038333856.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

    2. XM_038477929.1 → XP_038333857.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      7468991..7475108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603261.1 → XP_038459189.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

    2. XM_038603262.1 → XP_038459190.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      7632708..7638829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539176.1 → XP_038395104.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLU7, A0A8C0QLF4, A0A8I3RSA2

    2. XM_038539177.1 → XP_038395105.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      9412262..9418383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_844997.6 → XP_850090.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLU7, A0A8C0QLF4, A0A8I3RSA2

    2. XM_022419600.2 → XP_022275308.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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