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    TVAGG3_0398030 CCR4-NOT transcription complex subunit 11 family [ Trichomonas vaginalis G3 ]

    Gene ID: 4768066, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0398030
    Gene description
    CCR4-NOT transcription complex subunit 11 family
    Primary source
    TrichDB:TVAGG3_0398030
    Locus tag
    TVAGG3_0398030
    See related
    VEuPathDB:TVAGG3_0398030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0398030
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    Genomic context

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    See TVAGG3_0398030 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_067207.1 (24895812..24897203)

    Chromosome V - NC_067207.1Genomic Context describing neighboring genes Neighboring gene glycosyl hydrolase Neighboring gene protein ubiquitination Neighboring gene uncharacterized protein Neighboring gene ribonuclease inhibitor domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067207.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • replaces TrichDB:TVAG_088620

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 11 family
    XP_001322370.1
    • eggNOG seed ortholog:5722.XP_001583868.1;replaces TrichDB:TVAG_088620

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067207.1 Reference assembly

      Range
      24895812..24897203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001322335.1 → XP_001322370.1  CCR4-NOT transcription complex subunit 11 family [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001322370.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2EB07
      Conserved Domains (1) summary
      pfam10155
      Location:262 → 385
      DUF2363; Uncharacterized conserved protein (DUF2363)
    Nucleotide Protein
    Heading Accession and Version

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