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    si:dkey-162h11.3 si:dkey-162h11.3 [ Danio rerio (zebrafish) ]

    Gene ID: 100333859, updated on 27-Mar-2024

    Summary

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    Official Symbol
    si:dkey-162h11.3provided by ZNC
    Official Full Name
    si:dkey-162h11.3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-121214-324
    See related
    AllianceGenome:ZFIN:ZDB-GENE-121214-324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See si:dkey-162h11.3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (980370..998985)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (831403..844168)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101885459 Neighboring gene cell wall protein DAN4-like Neighboring gene ependymin-like 1 Neighboring gene dynactin 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    mucin-2-like; mucin-5AC-like; si:dkey-162h11.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      980370..998985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021478119.1 → XP_021333794.1  mucin-2-like isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q9C1
      Conserved Domains (1) summary
      pfam01390
      Location:2563 → 2645
      SEA; SEA domain

    2. XM_021478120.1 → XP_021333795.1  mucin-5AC-like isoform X2

      UniProtKB/TrEMBL
      A0A8M9QIB0
      Conserved Domains (1) summary
      pfam01390
      Location:2338 → 2420
      SEA; SEA domain
    Nucleotide Protein Strain
    Heading Accession and Version

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