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    ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 [ Capra hircus (goat) ]

    Gene ID: 102172097, updated on 10-Mar-2024

    Summary

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    Gene symbol
    ADAMTS5
    Gene description
    ADAM metallopeptidase with thrombospondin type 1 motif 5
    See related
    EnsemblRapid:ENSCHIG00000018986
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capra hircus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
    Orthologs
    human mouse all
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    Genomic context

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    See ADAMTS5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current ASM170441v1 (GCF_001704415.1) 1 NC_030808.1 (7818403..7871968)
    101 previous assembly CHIR_1.0 (GCF_000317765.1) 1 NC_022293.1 (8661654..8716749)

    Chromosome 1 - NC_030808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106503681 Neighboring gene uncharacterized LOC108636748 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 1 Neighboring gene cysteine and tyrosine rich 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    A disintegrin and metalloproteinase with thrombospondin motifs 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM170441v1 Primary Assembly

    Genomic

    1. NC_030808.1 Reference ASM170441v1 Primary Assembly

      Range
      7818403..7871968
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013965221.2 → XP_013820675.2  A disintegrin and metalloproteinase with thrombospondin motifs 5

      UniProtKB/TrEMBL
      A0A452F7Q5, A0A452F813
      Related
      ENSCHIP00000020287.2, ENSCHIT00000028120.2
    Nucleotide Protein
    Heading Accession and Version

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