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    ATP6V1B1 ATPase H+ transporting V1 subunit B1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 470401, updated on 29-Mar-2024

    Summary

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    Official Symbol
    ATP6V1B1provided by VGNC
    Official Full Name
    ATPase H+ transporting V1 subunit B1provided by VGNC
    Primary source
    VGNC:VGNC:10563
    Locus tag
    CK820_G0035600
    See related
    Ensembl:ENSPTRG00000012038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See ATP6V1B1 in Genome Data Viewer
    Location:
    chromosome: 2A
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (51758543..51788061, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (71065172..71094691)

    Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene testis expressed 261 Neighboring gene ankyrin repeat domain 53 Neighboring gene elongin-C-like Neighboring gene small nucleolar RNA U13 Neighboring gene ventral anterior homeobox 2 Neighboring gene uncharacterized LOC134807765

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ATP metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vacuolar acidification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase subunit B, kidney isoform
    Names
    ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acidosis with deafness)
    XP_001145161.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      51758543..51788061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001145161.6 → XP_001145161.2  V-type proton ATPase subunit B, kidney isoform

      UniProtKB/TrEMBL
      A0A2J8KUJ6, A0A2J8KUK5, A0A6D2WUF2, H2QI31
      Related
      ENSPTRP00000020664.6
      Conserved Domains (1) summary
      TIGR01040
      Location:40 → 503
      V-ATPase_V1_B; V-type (H+)-ATPase V1, B subunit
    Nucleotide Protein
    Heading Accession and Version

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