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    LOC112302159 DLA class II histocompatibility antigen, DR-1 beta chain [ Desmodus rotundus (common vampire bat) ]

    Gene ID: 112302159, updated on 30-Mar-2024

    Summary

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    Gene symbol
    LOC112302159
    Gene description
    DLA class II histocompatibility antigen, DR-1 beta chain
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Desmodus rotundus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
    Also known as
    Dero-DRB
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    Genomic context

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    See LOC112302159 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current HLdesRot8A (GCF_022682495.1) 11 NC_071397.1 (1566613..1578178, complement)
    101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020091182.1 (19647253..19666259)

    Chromosome 11 - NC_071397.1Genomic Context describing neighboring genes Neighboring gene testis expressed basic protein 1 Neighboring gene HLA class II histocompatibility antigen, DR alpha chain Neighboring gene SLA class II histocompatibility antigen, DQ haplotype D alpha chain Neighboring gene SLA class II histocompatibility antigen, DQ haplotype C beta chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Spatial pattern of genetic diversity and selection in the MHC class II DRB of three Neotropical bat species. Salmier A, et al. BMC Evol Biol, 2016 Oct 26. PMID 27782798, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables MHC class II protein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antigen processing and presentation of exogenous peptide antigen via MHC class II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immunoglobulin production involved in immunoglobulin-mediated immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptide antigen assembly with MHC class II protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MHC class II protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DLA class II histocompatibility antigen, DR-1 beta chain
    Names
    MHC class II antigen DR beta chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HLdesRot8A Primary Assembly

    Genomic

    1. NC_071397.1 Reference HLdesRot8A Primary Assembly

      Range
      1566613..1578178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_053914020.1 → XP_053769995.1  DLA class II histocompatibility antigen, DR-1 beta chain

    Nucleotide Protein
    Heading Accession and Version

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