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    agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103185181, updated on 11-Mar-2024

    Summary

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    Gene symbol
    agpat3
    Gene description
    1-acylglycerol-3-phosphate O-acyltransferase 3
    See related
    Ensembl:ENSCMIG00000017972
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
    Orthologs
    human zebrafish all
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    Genomic context

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    See agpat3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704745.1 (7038504..7058888, complement)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890163.1 (894987..905713)

    NW_024704745.1Genomic Context describing neighboring genes Neighboring gene periodic tryptophan protein 2 homolog Neighboring gene PWP2 small subunit processome component Neighboring gene pyridoxal (pyridoxine, vitamin B6) kinase a Neighboring gene fibroblast growth factor 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
    2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
    Names
    1-acyl-sn-glycerol-3-phosphate acyltransferase gamma-like protein
    NP_001279132.1
    XP_042189758.1
    XP_042189759.1
    XP_042189760.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001292203.1 → NP_001279132.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma

      See identical proteins and their annotated locations for NP_001279132.1

      Status: PROVISIONAL

      Source sequence(s)
      JX212042
      UniProtKB/TrEMBL
      K4G8L9, K4GCC8
      Conserved Domains (1) summary
      PLN02380
      Location:12 → 325
      PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704745.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      7038504..7058888 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042333825.1 → XP_042189759.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

      UniProtKB/TrEMBL
      K4G8L9, K4GCC8
      Conserved Domains (1) summary
      PLN02380
      Location:12 → 325
      PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

    2. XM_042333826.1 → XP_042189760.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

      UniProtKB/TrEMBL
      K4G8L9, K4GCC8
      Conserved Domains (1) summary
      PLN02380
      Location:12 → 325
      PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

    3. XM_042333824.1 → XP_042189758.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

      UniProtKB/TrEMBL
      K4G8L9, K4GCC8
      Conserved Domains (1) summary
      PLN02380
      Location:12 → 325
      PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version

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