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    IGLV5-39 immunoglobulin lambda variable 5-39 [ Homo sapiens (human) ]

    Gene ID: 28782, updated on 23-Nov-2023

    Summary

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    Official Symbol
    IGLV5-39provided by HGNC
    Official Full Name
    immunoglobulin lambda variable 5-39provided by HGNC
    Primary source
    HGNC:HGNC:5923
    See related
    IMGT/GENE-DB:IGLV5-39
    Gene type
    other
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    IGLV539
    Annotation information
    Annotation category: only annotated on alternate loci in reference assembly
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    Genomic context

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    See IGLV5-39 in Genome Data Viewer
    Location:
    22q11.2 alternate reference locus
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 (ALT_REF_LOCI_1) NT_187629.1 (29116..29715)

    NT_187629.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda variable 1-44-like Neighboring gene NANOG hESC enhancer GRCh37_chr22:22741343-22741913 Neighboring gene immunoglobulin lambda variable 7-43 Neighboring gene uncharacterized LOC105379605 Neighboring gene immunoglobulin lambda variable 1-40-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NT_187629.1 Chromosome 22 Reference GRCh38.p14 ALT_REF_LOCI_1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Initial sequencing and analysis of the human genome. Lander ES, et al. Nature, 2001 Feb 15. PMID 11237011
    2. Finishing the euchromatic sequence of the human genome. International Human Genome Sequencing Consortium. Nature, 2004 Oct 21. PMID 15496913
    3. Sequence and evolution of the human germline V lambda repertoire. Williams SC, et al. J Mol Biol, 1996 Nov 29. PMID 8951372
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Variation

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    See studies and variants in dbVar

    General gene information

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    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in immunoglobulin production IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of immunoglobulin complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187629.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      29116..29715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0G2JS06.1 GenPept UniProtKB/Swiss-Prot:A0A0G2JS06

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