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    atp11c ATPase, class VI, type 11C [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100498300, updated on 25-Apr-2024

    Summary

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    Official Symbol
    atp11cprovided by Xenbase
    Official Full Name
    ATPase, class VI, type 11Cprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-976439
    See related
    Ensembl:ENSXETG00000018290
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See atp11c in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (70037358..70117133, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (48936612..49017335, complement)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene coagulation factor 9 Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene uncharacterized LOC116406941 Neighboring gene Rho GTPase activating protein 35

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled intramembrane lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phospholipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    phospholipid-transporting ATPase IG
    Names
    probable phospholipid-transporting ATPase 11C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      70037358..70117133 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012969232.3 → XP_012824686.2  phospholipid-transporting ATPase IG isoform X1

      UniProtKB/TrEMBL
      A0A6I8RTK2, A0A8J0R6E9
      Related
      ENSXETP00000086069.2, ENSXETT00000080760.2
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    2. XM_031891896.1 → XP_031747756.1  phospholipid-transporting ATPase IG isoform X1

      UniProtKB/TrEMBL
      A0A6I8RTK2, A0A8J0R6E9
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    3. XM_002932596.5 → XP_002932642.3  phospholipid-transporting ATPase IG isoform X3

      UniProtKB/TrEMBL
      A0A6I8S9Y8, A0A8J0QI37
      Related
      ENSXETP00000094261.2, ENSXETT00000085189.2
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    4. XM_004916948.4 → XP_004917005.2  phospholipid-transporting ATPase IG isoform X1

      UniProtKB/TrEMBL
      A0A6I8RTK2, A0A8J0R6E9
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    5. XM_012969233.3 → XP_012824687.2  phospholipid-transporting ATPase IG isoform X2

      UniProtKB/TrEMBL
      A0A6I8RMX9, A0A6I8S4N8
      Related
      ENSXETP00000086188.2, ENSXETT00000066779.2
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    6. XM_004916950.4 → XP_004917007.2  phospholipid-transporting ATPase IG isoform X5

      UniProtKB/TrEMBL
      A0A6I8S4N8, A0A8J0R3Y9
      Related
      ENSXETP00000080040.2, ENSXETT00000100982.2
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    7. XM_004916949.4 → XP_004917006.2  phospholipid-transporting ATPase IG isoform X4

      UniProtKB/TrEMBL
      A0A6I8S4N8, A0A6I8SJG8
      Related
      ENSXETP00000098437.2, ENSXETT00000073658.2
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling

    8. XM_031891897.1 → XP_031747757.1  phospholipid-transporting ATPase IG isoform X5

      UniProtKB/TrEMBL
      A0A6I8S4N8, A0A8J0R3Y9
      Conserved Domains (2) summary
      cd02073
      Location:42 → 971
      P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
      pfam07695
      Location:954 → 1071
      7TMR-DISM_7TM; 7TM diverse intracellular signalling
    Nucleotide Protein Strain
    Heading Accession and Version

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