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    Krtap11-1 keratin associated protein 11-1 [ Mus musculus (house mouse) ]

    Gene ID: 16693, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Krtap11-1provided by MGI
    Official Full Name
    keratin associated protein 11-1provided by MGI
    Primary source
    MGI:MGI:99447
    See related
    Ensembl:ENSMUSG00000091212 AllianceGenome:MGI:99447
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hacl1; PRED29; KAP11.1
    Summary
    Is expressed in several structures, including alimentary system; genitourinary system; nervous system; sensory organ; and skin. Orthologous to human KRTAP11-1 (keratin associated protein 11-1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human all
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    Genomic context

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    See Krtap11-1 in Genome Data Viewer
    Location:
    16 C3.3; 16 51.42 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (89367064..89368071, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (89570176..89571183, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 8-1 Neighboring gene keratin associated protein 7-1 Neighboring gene STARR-seq mESC enhancer starr_41421 Neighboring gene STARR-seq mESC enhancer starr_41422 Neighboring gene STARR-seq mESC enhancer starr_41423 Neighboring gene cyclin G1 pseudogene Neighboring gene predicted gene, 35500 Neighboring gene STARR-seq mESC enhancer starr_41424 Neighboring gene STARR-seq mESC enhancer starr_41425 Neighboring gene STARR-seq mESC enhancer starr_41426

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of a novel hair follicle-specific gene, Hacl-1. Huh N, et al. J Invest Dermatol, 1994 May. PMID 7513738
    2. Krtap16, characterization of a new hair keratin-associated protein (KAP) gene complex on mouse chromosome 16 and evidence for regulation by Hoxc13. Pruett ND, et al. J Biol Chem, 2004 Dec 3. PMID 15385554
    3. Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair. Wu DD, et al. BMC Evol Biol, 2008 Aug 23. PMID 18721477, Free PMC Article
    4. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, et al. Nature, 2002 Dec 5. PMID 12466855
    5. Human chromosome 21 gene expression atlas in the mouse. Reymond A, et al. Nature, 2002 Dec 5. PMID 12466854

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    keratin associated protein 11-1
    Names
    keratin-associated protein 11.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113406.1 → NP_001106877.1  keratin associated protein 11-1

      Status: VALIDATED

      Source sequence(s)
      AC140433
      Consensus CDS
      CCDS49903.1
      UniProtKB/TrEMBL
      E9Q2E9
      Related
      ENSMUSP00000129948.2, ENSMUST00000171542.2
      Conserved Domains (1) summary
      pfam05287
      Location:1 → 165
      PMG; PMG protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      89367064..89368071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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