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    ZSCAN30 zinc finger and SCAN domain containing 30 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708199, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ZSCAN30provided by VGNC
    Official Full Name
    zinc finger and SCAN domain containing 30provided by VGNC
    Primary source
    VGNC:VGNC:79933
    See related
    Ensembl:ENSMMUG00000062080
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNF397OS
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN30 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (47217538..47253513)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (23956617..23992503, complement)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994480 Neighboring gene zinc finger protein 396 Neighboring gene zinc finger protein 24 Neighboring gene zinc finger protein 271 Neighboring gene proline-rich protein 36-like Neighboring gene uncharacterized LOC114673697 Neighboring gene uncharacterized LOC106994479 Neighboring gene zinc finger protein 397

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 30
    Names
    zinc finger protein 397 opposite strand

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      47217538..47253513
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104028.4 → XP_001104028.1  zinc finger and SCAN domain-containing protein 30

      See identical proteins and their annotated locations for XP_001104028.1

      UniProtKB/TrEMBL
      A0A5F7Z7C0
      Conserved Domains (4) summary
      COG5048
      Location:217 → 458
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:329 → 349
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:453 → 478
      zf-H2C2_2; Zinc-finger double domain
      cl02605
      Location:44 → 154
      SCAN; SCAN oligomerization domain

    2. XM_002800906.3 → XP_002800952.1  zinc finger and SCAN domain-containing protein 30

      See identical proteins and their annotated locations for XP_002800952.1

      UniProtKB/TrEMBL
      A0A5F7Z7C0
      Related
      ENSMMUP00000061314.1, ENSMMUT00000092776.1
      Conserved Domains (4) summary
      COG5048
      Location:217 → 458
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:329 → 349
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:453 → 478
      zf-H2C2_2; Zinc-finger double domain
      cl02605
      Location:44 → 154
      SCAN; SCAN oligomerization domain

    RNA

    1. XR_003724481.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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