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    mon1a MON1 secretory trafficking family member A [ Danio rerio (zebrafish) ]

    Gene ID: 100073333, updated on 27-Mar-2024

    Summary

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    Official Symbol
    mon1aprovided by ZNC
    Official Full Name
    MON1 secretory trafficking family member Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070615-6
    See related
    Ensembl:ENSDARG00000078585 AllianceGenome:ZFIN:ZDB-GENE-070615-6
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:162873
    Summary
    Predicted to be involved in protein targeting to vacuole. Predicted to act upstream of or within vesicle-mediated transport. Orthologous to human MON1A (MON1 homolog A, secretory trafficking associated). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (35171347..35185057)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (34909418..34923074)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene inka box actin regulator 1a Neighboring gene TRAF-interacting protein Neighboring gene uncharacterized LOC101884091 Neighboring gene macrophage stimulating 1 receptor b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Semaphorin/neuropilin binding specificities are stable over 400 million years of evolution. He Z, et al. Biochem Biophys Res Commun, 2019 Sep 10. PMID 31349972, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein targeting to vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Mon1-Ccz1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    vacuolar fusion protein MON1 homolog A
    Names
    MON1 homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001320431.1 → NP_001307360.1  vacuolar fusion protein MON1 homolog A

      Status: VALIDATED

      Source sequence(s)
      BX293991, EH474242, FP102275
      UniProtKB/TrEMBL
      A0A8M1P7N8, F1QDK1
      Related
      ENSDARP00000102772.3, ENSDART00000110839.4
      Conserved Domains (1) summary
      pfam03164
      Location:129 → 529
      Mon1; Trafficking protein Mon1

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      35171347..35185057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_002459641.1 RNA Sequence

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394824.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      1..9479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001098770.1: Suppressed sequence

      Description
      NM_001098770.1: This RefSeq was removed because currently there is insufficient support for the transcript.
    Nucleotide Protein Strain
    Heading Accession and Version

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