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    armc5 armadillo repeat containing 5 [ Danio rerio (zebrafish) ]

    Gene ID: 569910, updated on 27-Mar-2024

    Summary

    Official Symbol
    armc5provided by ZNC
    Official Full Name
    armadillo repeat containing 5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7382
    See related
    Ensembl:ENSDARG00000078083 AllianceGenome:ZFIN:ZDB-GENE-030131-7382
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fj13a12
    Summary
    Human ortholog(s) of this gene implicated in ACTH-independent macronodular adrenal hyperplasia 2. Orthologous to human ARMC5 (armadillo repeat containing 5). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See armc5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (31042624..31058189, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (30912638..30927348, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene glycine-rich cell wall structural protein-like Neighboring gene cytochrome c oxidase subunit 6A2 Neighboring gene si:dkey-66i24.7 Neighboring gene uncharacterized LOC569097

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    armadillo repeat-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      31042624..31058189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021474093.1XP_021329768.1  armadillo repeat-containing protein 5

      UniProtKB/TrEMBL
      A0A8M9PRW1, U3JA44
      Related
      ENSDARP00000127109.1, ENSDART00000152901.2
      Conserved Domains (1) summary
      sd00043
      Location:136170
      ARM; armadillo repeat [structural motif]

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394534.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      116742..131051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_693324.8XP_698416.4  armadillo repeat-containing protein 5

      UniProtKB/TrEMBL
      A0A8N7T8J6
      Conserved Domains (1) summary
      sd00043
      Location:136170
      ARM; armadillo repeat [structural motif]