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    H2ac18 H2A clustered histone 18 [ Mus musculus (house mouse) ]

    Gene ID: 15267, updated on 8-Feb-2024

    Summary

    Official Symbol
    H2ac18provided by MGI
    Official Full Name
    H2A clustered histone 18provided by MGI
    Primary source
    MGI:MGI:96097
    See related
    Ensembl:ENSMUSG00000064220 AllianceGenome:MGI:96097
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hist2; H2a-614; H2a-615; Hist2h2aa1
    Summary
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H2A family. [provided by RefSeq, Oct 2015]
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    Genomic context

    See H2ac18 in Genome Data Viewer
    Location:
    3 F2.1; 3 41.69 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96152853..96153439)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96245497..96246052)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene H3 clustered histone 15 Neighboring gene H2A clustered histone 19 Neighboring gene STARR-seq mESC enhancer starr_08410 Neighboring gene H3 clustered histone 14 Neighboring gene STARR-positive B cell enhancer ABC_E10201 Neighboring gene STARR-seq mESC enhancer starr_08411 Neighboring gene predicted gene 20627

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    histone H2A type 2-A
    Names
    histone cluster 2, H2aa1
    histone gene complex 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013549.3NP_038577.1  histone H2A type 2-A

      See identical proteins and their annotated locations for NP_038577.1

      Status: VALIDATED

      Source sequence(s)
      AC125099
      Consensus CDS
      CCDS57242.1
      UniProtKB/Swiss-Prot
      Q6GSS7, Q811M3
      UniProtKB/TrEMBL
      A0AUV1, B2RWH3
      Related
      ENSMUSP00000077814.6, ENSMUST00000078756.7
      Conserved Domains (1) summary
      PTZ00017
      Location:1130
      PTZ00017; histone H2A; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96152853..96153439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)