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    CG15617 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36871, updated on 10-May-2024

    Summary

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    Official Symbol
    CG15617provided by FlyBase
    Primary source
    FLYBASE:FBgn0034151
    Locus tag
    Dmel_CG15617
    See related
    AllianceGenome:FB:FBgn0034151
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT35755; Dmel\CG15617
    Summary
    Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG15617 in Genome Data Viewer
    Location:
    53D5-53D5; 2-80 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16745223..16746579, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12632728..12634084, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44464 Neighboring gene Seminal fluid protein 53D Neighboring gene Accessory gland protein 53C14a Neighboring gene Accessory gland protein 53C14b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptomic identification and characterization of genes commonly responding to sublethal concentrations of six different insecticides in the common fruit fly, Drosophila melanogaster. Gao Y, et al. Pestic Biochem Physiol, 2021 Jun. PMID 33993970
    2. Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior. Ceriani MF, et al. J Neurosci, 2002 Nov 1. PMID 12417656, Free PMC Article
    3. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15617-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16745223..16746579 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137307.4 → NP_611151.1  uncharacterized protein Dmel_CG15617 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611151.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAI8
      Related
      FBpp0086231
      Conserved Domains (1) summary
      cd00992
      Location:30 → 111
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZAI8 A1ZAI8

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