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    CG13901 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38095, updated on 10-May-2024

    Summary

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    Official Symbol
    CG13901provided by FlyBase
    Primary source
    FLYBASE:FBgn0035164
    Locus tag
    Dmel_CG13901
    See related
    AllianceGenome:FB:FBgn0035164
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13901
    Summary
    Predicted to be involved in cilium movement. Orthologous to human DPCD (deleted in primary ciliary dyskinesia homolog (mouse)). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG13901 in Genome Data Viewer
    Location:
    61D2-61D2; 3-0.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (836667..837821, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (836667..837821, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Splicing factor 3b subunit 3 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Jumonji domain containing 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Satellite DNA-containing gigantic introns in a unique gene expression program during Drosophila spermatogenesis. Fingerhut JM, et al. PLoS Genet, 2019 May. PMID 31071079, Free PMC Article
    2. Selection for cold resistance alters gene transcript levels in Drosophila melanogaster. Telonis-Scott M, et al. J Insect Physiol, 2009 Jun. PMID 19232407
    3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    4. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    5. Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes. Hosono C, et al. Nat Cell Biol, 2015 Dec. PMID 26551273

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cilium movement ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13901-PA
    CG13901-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      836667..837821 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274295.1 → NP_001261224.1  uncharacterized protein Dmel_CG13901, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0M5
      Conserved Domains (1) summary
      pfam14913
      Location:6 → 211
      DPCD; DPCD protein family

    2. NM_138217.3 → NP_612061.2  uncharacterized protein Dmel_CG13901, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612061.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0M5
      Related
      FBpp0072493
      Conserved Domains (1) summary
      pfam14913
      Location:6 → 211
      DPCD; DPCD protein family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SZ57 Q8SZ57
    Q9W0M5 Q9W0M5

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