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    si:ch211-152c8.5 si:ch211-152c8.5 [ Danio rerio (zebrafish) ]

    Gene ID: 100330524, updated on 27-Mar-2024

    Summary

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    Official Symbol
    si:ch211-152c8.5provided by ZNC
    Official Full Name
    si:ch211-152c8.5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5764
    See related
    Ensembl:ENSDARG00000104576 AllianceGenome:ZFIN:ZDB-GENE-030131-5764
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi17a12; ppp1r3g; wu:fi17a12
    Summary
    Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be part of protein phosphatase type 1 complex. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    See si:ch211-152c8.5 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (2826218..2829276, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (2827474..2830399, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene neuritin 1a Neighboring gene phenylalanyl-tRNA synthetase 2, mitochondrial Neighboring gene LYR motif containing 4 Neighboring gene si:ch211-152c8.2 Neighboring gene chromosome 24 C18orf63 homolog Neighboring gene cytochrome b5 type A (microsomal)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables glycogen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein phosphatase 1 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of glycogen biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of protein phosphatase type 1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 3G
    Names
    protein phosphatase 1, regulatory subunit 3G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      2826218..2829276 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005162938.4 → XP_005162995.1  protein phosphatase 1 regulatory subunit 3G

      UniProtKB/TrEMBL
      A0A8M2B9X2
      Related
      ENSDARP00000132511.1, ENSDART00000164913.2
      Conserved Domains (1) summary
      cl23798
      Location:171 → 269
      CBM_21; Carbohydrate/starch-binding module (family 21)
    Nucleotide Protein Strain
    Heading Accession and Version

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