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    LOC100273454 uncharacterized LOC100273454 [ Zea mays ]

    Gene ID: 100273454, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100273454
    Gene description
    uncharacterized LOC100273454
    Locus tag
    ZEAMMB73_Zm00001d020401
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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    Genomic context

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    See LOC100273454 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (112848300..112849850, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (111461711..111463261, complement)

    Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene protein trichome birefringence-like 14 Neighboring gene putative cinnamyl alcohol dehydrogenase 6 Neighboring gene uncharacterized LOC100273263 Neighboring gene uncharacterized LOC100281079

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cinnamyl-alcohol dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lignin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Probable cinnamyl alcohol dehydrogenase 8D
    Names
    putative cinnamyl alcohol dehydrogenase 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001147891.1 → NP_001141363.1  Probable cinnamyl alcohol dehydrogenase 8D

      See identical proteins and their annotated locations for NP_001141363.1

      Status: PROVISIONAL

      Source sequence(s)
      BT065884
      UniProtKB/TrEMBL
      B4FVN5, C4J6C4
      Conserved Domains (1) summary
      cd05283
      Location:8 → 350
      CAD1; Cinnamyl alcohol dehydrogenases (CAD)

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      112848300..112849850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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