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    Flywch2 FLYWCH family member 2 [ Mus musculus (house mouse) ]

    Gene ID: 76917, updated on 30-Apr-2024

    Summary

    Official Symbol
    Flywch2provided by MGI
    Official Full Name
    FLYWCH family member 2provided by MGI
    Primary source
    MGI:MGI:1924167
    See related
    Ensembl:ENSMUSG00000023911 AllianceGenome:MGI:1924167
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2810417J12Rik; 3010014L17Rik
    Summary
    Is expressed in brain; spinal cord; and testis. Orthologous to human FLYWCH2 (FLYWCH family member 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in CNS E18 (RPKM 10.3), whole brain E14.5 (RPKM 10.2) and 23 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Flywch2 in Genome Data Viewer
    Location:
    17 A3.3; 17 12.05 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (23995888..24005190, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23776914..23786216, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene kringle containing transmembrane protein 2 Neighboring gene RIKEN cDNA 9530082P21 gene Neighboring gene FLYWCH-type zinc finger 1 Neighboring gene STARR-positive B cell enhancer ABC_E4197 Neighboring gene predicted gene, 52285 Neighboring gene serine/arginine repetitive matrix 2 Neighboring gene microRNA 5125

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001357140.1NP_001344069.1  FLYWCH family member 2

      Status: VALIDATED

      Source sequence(s)
      AW124500, BY259710, CF740309
      Consensus CDS
      CCDS28464.1
      UniProtKB/Swiss-Prot
      Q8R3N7, Q9CQE9
      Conserved Domains (1) summary
      pfam15423
      Location:1106
      FLYWCH_N; FLYWCH-type zinc finger-containing protein
    2. NM_029798.4NP_084074.1  FLYWCH family member 2

      See identical proteins and their annotated locations for NP_084074.1

      Status: VALIDATED

      Source sequence(s)
      AC122821, AK013108, AW124500
      Consensus CDS
      CCDS28464.1
      UniProtKB/Swiss-Prot
      Q8R3N7, Q9CQE9
      Related
      ENSMUSP00000024704.4, ENSMUST00000024704.10
      Conserved Domains (1) summary
      pfam15423
      Location:1106
      FLYWCH_N; FLYWCH-type zinc finger-containing protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      23995888..24005190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001782129.3 RNA Sequence