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    Ccdc96 coiled-coil domain containing 96 [ Mus musculus (house mouse) ]

    Gene ID: 66717, updated on 5-Mar-2024

    Summary

    Official Symbol
    Ccdc96provided by MGI
    Official Full Name
    coiled-coil domain containing 96provided by MGI
    Primary source
    MGI:MGI:1913967
    See related
    Ensembl:ENSMUSG00000050677 AllianceGenome:MGI:1913967
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4921513E08Rik
    Summary
    Predicted to be involved in cilium assembly. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in axoneme and ciliary basal body. Is expressed in olfactory epithelium. Orthologous to human CCDC96 (coiled-coil domain containing 96). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See Ccdc96 in Genome Data Viewer
    Location:
    5 B3; 5 19.14 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (36641932..36645515)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (36484588..36488171)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2210406O10 gene Neighboring gene STARR-positive B cell enhancer ABC_E65 Neighboring gene STARR-positive B cell enhancer ABC_E3572 Neighboring gene GrpE-like 1, mitochondrial Neighboring gene transcriptional adaptor 2B Neighboring gene TBC1 domain family, member 14 Neighboring gene predicted gene, 32528 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:36872352-36872539 Neighboring gene STARR-positive B cell enhancer ABC_E6323 Neighboring gene STARR-positive B cell enhancer ABC_E10317 Neighboring gene STARR-positive B cell enhancer ABC_E4753 Neighboring gene DNA segment, Chr 5, ERATO Doi 579, expressed Neighboring gene predicted gene, 32584

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cilium assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in axoneme IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in ciliary basal body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 96

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025725.3NP_080001.1  coiled-coil domain-containing protein 96

      See identical proteins and their annotated locations for NP_080001.1

      Status: VALIDATED

      Source sequence(s)
      AK014878, AK030023
      Consensus CDS
      CCDS19239.1
      UniProtKB/Swiss-Prot
      Q9CR92
      UniProtKB/TrEMBL
      Q08AT2
      Related
      ENSMUSP00000059636.2, ENSMUST00000060100.3
      Conserved Domains (1) summary
      pfam13870
      Location:394570
      DUF4201; Domain of unknown function (DUF4201)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      36641932..36645515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)