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    Or8k31-ps1 olfactory receptor family 8 subfamily K member 31, pseudogene 1 [ Mus musculus (house mouse) ]

    Gene ID: 625853, updated on 27-Apr-2024

    Summary

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    Official Symbol
    Or8k31-ps1provided by MGI
    Official Full Name
    olfactory receptor family 8 subfamily K member 31, pseudogene 1provided by MGI
    Primary source
    MGI:MGI:3030911
    See related
    AllianceGenome:MGI:3030911
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR189-4P; Olfr1077-ps1
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. An allelic polymorphism in this gene results in both coding and non-coding variants; the reference genome represents the non-coding allele. [provided by RefSeq, Apr 2024]
    Annotation information
    Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
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    Genomic context

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    See Or8k31-ps1 in Genome Data Viewer
    Location:
    2 D; 2 49.83 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (86356005..86358771, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (86525661..86528427, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor GA_x5J8B7W4CQV-104617-103730 Neighboring gene olfactory receptor family 8 subfamily K member 30 Neighboring gene olfactory receptor family 8 subfamily AA member 1, pseudogene 1 Neighboring gene olfactory receptor family 8 subfamily K member 32

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of potential regulatory motifs in odorant receptor genes by analysis of promoter sequences. Michaloski JS, et al. Genome Res, 2006 Sep. PMID 16902085, Free PMC Article
    2. The olfactory receptor gene superfamily of the mouse. Zhang X, et al. Nat Neurosci, 2002 Feb. PMID 11802173
    3. Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Young JM, et al. Hum Mol Genet, 2002 Mar 1. PMID 11875048
    4. Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Young JM, et al. Genome Biol, 2003. PMID 14611657, Free PMC Article
    5. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    olfactory receptor family 8 subfamily K member 31, pseudogene 1
    Names
    GA_x6K02T2Q125-48011447-48010506
    olfactory receptor 1077, pseudogene 1
    olfactory receptor MOR189-4P

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001429660.1 → NP_001416589.1  olfactory receptor family 8 subfamily K member 31, pseudogene 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (coding) represents the functional allele that is not present in some strains, including the strain of the reference genome.
      Source sequence(s)
      OW971659

    RNA

    1. NR_190757.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (non-coding) includes a premature stop codon, and represents the non-functional allele present in some strains, including the strain of the reference genome.
      Source sequence(s)
      AL772265

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      86356005..86358771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_001878.1: Suppressed sequence

      Description
      NG_001878.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.

    2. NR_033507.2: Suppressed sequence

      Description
      NR_033507.2: This RefSeq was removed by NCBI staff.
    Nucleotide Protein Strain
    Heading Accession and Version

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