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    Gm8096 predicted gene 8096 [ Mus musculus (house mouse) ]

    Gene ID: 666422, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm8096provided by MGI
    Official Full Name
    predicted gene 8096provided by MGI
    Gene description
    3-phosphoglycerate dehydrogenase pseudogene
    Primary source
    MGI:MGI:3645752
    See related
    Ensembl:ENSMUSG00000110372 AllianceGenome:MGI:3645752
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG666422
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    Genomic context

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    See Gm8096 in Genome Data Viewer
    Location:
    8 A2; 8 16.31 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (28573222..28574881, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (28083194..28084853, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24202 Neighboring gene STARR-seq mESC enhancer starr_21046 Neighboring gene STARR-seq mESC enhancer starr_21048 Neighboring gene predicted gene, 39153 Neighboring gene STARR-seq mESC enhancer starr_21050 Neighboring gene STARR-seq mESC enhancer starr_21051 Neighboring gene STARR-seq mESC enhancer starr_21052 Neighboring gene STARR-seq mESC enhancer starr_21053 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_21054 Neighboring gene STARR-seq mESC enhancer starr_21055 Neighboring gene testis expressed gene 24 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • 3-phosphoglycerate dehydrogenase pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033590.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC161042
      Related
      ENSMUST00000209921.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      28573222..28574881 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_017095.1: Suppressed sequence

      Description
      NG_017095.1: This RefSeq was permanently suppressed because there is sufficient evidence that this locus is transcribed.
    Nucleotide Protein Strain
    Heading Accession and Version

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