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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001277330.2 → NP_001264259.1 peroxisomal targeting signal 1 receptor isoform 2
See identical proteins and their annotated locations for NP_001264259.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1. Variants 2 and 4 encode the same protein (isoform 2).
- Source sequence(s)
-
AC124470
- Consensus CDS
-
CCDS20518.1
- UniProtKB/Swiss-Prot
-
O09012
- Related
- ENSMUSP00000108150.2, ENSMUST00000112531.8
- Conserved Domains (2) summary
-
- sd00006
Location:451 → 479
- TPR; TPR repeat [structural motif]
- cl26002
Location:311 → 546
- TPR_11; TPR repeat
-
NM_001277805.2 → NP_001264734.1 peroxisomal targeting signal 1 receptor isoform 1
See identical proteins and their annotated locations for NP_001264734.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1, 5, 7, and 8 all encode the same isoform (1).
- Source sequence(s)
-
AC124470
- Consensus CDS
-
CCDS20517.1
- UniProtKB/Swiss-Prot
- O09012, Q3UM58, Q8K2V5, Q91YC7
- Related
- ENSMUSP00000049132.6, ENSMUST00000035861.6
- Conserved Domains (3) summary
-
- TIGR02917
Location:348 → 583
- PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
- sd00006
Location:488 → 516
- TPR; TPR repeat [structural motif]
- cl02686
Location:307 → 342
- PRY; SPRY-associated domain
-
NM_001360570.2 → NP_001347499.1 peroxisomal targeting signal 1 receptor isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC124470
- Consensus CDS
-
CCDS20518.1
- Conserved Domains (2) summary
-
- sd00006
Location:451 → 479
- TPR; TPR repeat [structural motif]
- cl26002
Location:311 → 546
- TPR_11; TPR repeat
-
NM_001410279.1 → NP_001397208.1 peroxisomal targeting signal 1 receptor isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC124470
- UniProtKB/Swiss-Prot
- O09012, Q3UM58, Q8K2V5, Q91YC7
-
NM_001410280.1 → NP_001397209.1 peroxisomal targeting signal 1 receptor isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC124470
- UniProtKB/Swiss-Prot
- O09012, Q3UM58, Q8K2V5, Q91YC7
-
NM_001410281.1 → NP_001397210.1 peroxisomal targeting signal 1 receptor isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC124470
- UniProtKB/TrEMBL
-
D3Z600
- Related
- ENSMUSP00000108149.2, ENSMUST00000112530.8
-
NM_008995.3 → NP_033021.2 peroxisomal targeting signal 1 receptor isoform 1
See identical proteins and their annotated locations for NP_033021.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest protein (isoform 1). Variants 1, 5, 7, and 8 all encode the same isoform (1).
- Source sequence(s)
-
AC124470
- Consensus CDS
-
CCDS20517.1
- UniProtKB/Swiss-Prot
- O09012, Q3UM58, Q8K2V5, Q91YC7
- Related
- ENSMUSP00000108151.2, ENSMUST00000112532.8
- Conserved Domains (3) summary
-
- TIGR02917
Location:348 → 583
- PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
- sd00006
Location:488 → 516
- TPR; TPR repeat [structural motif]
- cl02686
Location:307 → 342
- PRY; SPRY-associated domain
-
NM_175933.3 → NP_787947.1 peroxisomal targeting signal 1 receptor isoform 2
See identical proteins and their annotated locations for NP_787947.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR and lacks an alternate in-frame exon in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1. Variants 2 and 4 encode the same protein (isoform 2).
- Source sequence(s)
-
AC124470
- Consensus CDS
-
CCDS20518.1
- UniProtKB/Swiss-Prot
-
O09012
- Related
- ENSMUSP00000079398.6, ENSMUST00000080557.12
- Conserved Domains (2) summary
-
- sd00006
Location:451 → 479
- TPR; TPR repeat [structural motif]
- cl26002
Location:311 → 546
- TPR_11; TPR repeat
RNA
-
NR_176972.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC124470
-
NR_176973.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC124470
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
124373774..124392878 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)