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    Sirpd signal regulatory protein delta [ Mus musculus (house mouse) ]

    Gene ID: 751864, updated on 30-Apr-2024

    Summary

    Official Symbol
    Sirpdprovided by MGI
    Official Full Name
    signal regulatory protein deltaprovided by MGI
    Primary source
    MGI:MGI:3780136
    See related
    Ensembl:ENSMUSG00000078783 AllianceGenome:MGI:3780136
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9733
    Summary
    Predicted to be involved in positive regulation of T cell activation and positive regulation of phagocytosis. Predicted to be active in plasma membrane. Orthologous to human SIRPD (signal regulatory protein delta). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Sirpd in Genome Data Viewer
    Location:
    3 A1; 3 3.55 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (15360163..15397362, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (15295063..15332310, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07017 Neighboring gene predicted gene, 42000 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:15105686-15105889 Neighboring gene STARR-seq mESC enhancer starr_07022 Neighboring gene predicted gene, 33819 Neighboring gene STARR-positive B cell enhancer ABC_E7901 Neighboring gene STARR-positive B cell enhancer ABC_E7902 Neighboring gene STARR-seq mESC enhancer starr_07024 Neighboring gene STARR-seq mESC enhancer starr_07025 Neighboring gene STARR-seq mESC enhancer starr_07026 Neighboring gene signal-regulatory protein beta 1A Neighboring gene signal-regulatory protein beta 1B Neighboring gene zinc finger protein 947 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in positive regulation of T cell activation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC751864
    Names
    SIRP beta 1 like 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076679.2NP_001070147.1  uncharacterized protein LOC751864 precursor

      See identical proteins and their annotated locations for NP_001070147.1

      Status: PREDICTED

      Source sequence(s)
      DQ055452
      Consensus CDS
      CCDS38393.1
      UniProtKB/TrEMBL
      Q1AN91
      Related
      ENSMUSP00000103998.2, ENSMUST00000108361.2
      Conserved Domains (1) summary
      cl11960
      Location:32141
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      15360163..15397362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530092.4XP_006530155.1  uncharacterized protein LOC751864 isoform X1

      See identical proteins and their annotated locations for XP_006530155.1

      UniProtKB/TrEMBL
      Q1AN91
      Conserved Domains (1) summary
      cl11960
      Location:32141
      Ig; Immunoglobulin domain