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    plp2a proteolipid protein 2a [ Danio rerio (zebrafish) ]

    Gene ID: 664695, updated on 11-Apr-2024

    Summary

    Official Symbol
    plp2aprovided by ZNC
    Official Full Name
    proteolipid protein 2aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060312-11
    See related
    Ensembl:ENSDARG00000042972 AllianceGenome:ZFIN:ZDB-GENE-060312-11
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zK70P6.4; zgc:136605; si:dkey-70p6.4
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PLP2 (proteolipid protein 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
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    Genomic context

    See plp2a in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (22955478..22959328)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (22934239..22938089)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, L type, alpha 1F subunit Neighboring gene synaptophysin a Neighboring gene elastin microfibril interfacer 3a Neighboring gene sterile alpha motif domain containing 10a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC136605

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC664695

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039835.1NP_001034924.1  uncharacterized protein LOC664695

      See identical proteins and their annotated locations for NP_001034924.1

      Status: PREDICTED

      Source sequence(s)
      BC114225
      UniProtKB/TrEMBL
      A0A8M1N8C4, Q29RF3
      Related
      ENSDARP00000090684.4, ENSDART00000099911.5

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      22955478..22959328
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395272.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      203247..207059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)