Ceacam12 CEA cell adhesion molecule 12 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Ceacam12provided by RGD
Official Full Name: CEA cell adhesion molecule 12provided by RGD
Primary source: RGD:1306754
See related: Ensembl:ENSRNOG00000042158 AllianceGenome:RGD:1306754
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Igfl3
Summary: Predicted to be located in apical plasma membrane. Orthologous to several human genes including CEACAM4 (CEA cell adhesion molecule 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 1q21

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (87344541..87351596)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (78216471..78223526)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (79474809..79481865)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in T cell activation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in external side of plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: carcinoembryonic antigen-related cell adhesion molecule 3

Names: CEA-related cell adhesion molecule 12; IGF-like family member 3; IGF-like family member 3-like; carcinoembryonic antigen-related cell adhesion molecule 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001108474.1 → NP_001101944.1 carcinoembryonic antigen-related cell adhesion molecule 3

See identical proteins and their annotated locations for NP_001101944.1

Status: PROVISIONAL

Source sequence(s)

CH473979

UniProtKB/TrEMBL

A0A8J8YCD1, B0BNJ2, D4A2T3

Conserved Domains (1) summary

cd05774
Location:36 → 140

Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)