U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Trav12n-1 T cell receptor alpha variable 12N-1 [ Mus musculus (house mouse) ]

    Gene ID: 100043218, updated on 8-Feb-2024

    Summary

    Official Symbol
    Trav12n-1provided by MGI
    Official Full Name
    T cell receptor alpha variable 12N-1provided by MGI
    Primary source
    MGI:MGI:3782477
    See related
    Ensembl:ENSMUSG00000096055 IMGT/GENE-DB:TRAV12N-1; AllianceGenome:MGI:3782477
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm11046
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Trav12n-1 in Genome Data Viewer
    Location:
    14 C2; 14 27.25 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (53393064..53393545)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (53155607..53156088)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene T cell receptor alpha chain Neighboring gene STARR-seq mESC enhancer starr_36715 Neighboring gene T cell receptor alpha variable 13N-1 Neighboring gene T cell receptor alpha variable 14N-1 Neighboring gene T cell receptor alpha variable 7N-5 Neighboring gene T cell receptor alpha variable 11N

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007044.1 

      Range
      728141..728622
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      53393064..53393545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)