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    Spry1 sprouty RTK signaling antagonist 1 [ Mus musculus (house mouse) ]

    Gene ID: 24063, updated on 14-May-2024

    Summary

    Official Symbol
    Spry1provided by MGI
    Official Full Name
    sprouty RTK signaling antagonist 1provided by MGI
    Primary source
    MGI:MGI:1345139
    See related
    Ensembl:ENSMUSG00000037211 AllianceGenome:MGI:1345139
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    spry-1; sprouty1
    Summary
    Involved in negative regulation of cell differentiation and negative regulation of signal transduction. Acts upstream of or within several processes, including bud elongation involved in lung branching; kidney development; and negative regulation of signal transduction. Predicted to be located in Golgi apparatus and nucleoplasm. Predicted to be active in cytosol. Is expressed in several structures, including alimentary system; branchial arch; embryo ectoderm; limb; and sensory organ. Orthologous to human SPRY1 (sprouty RTK signaling antagonist 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in lung adult (RPKM 52.2), genital fat pad adult (RPKM 23.9) and 24 other tissues See more
    Orthologs
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    Genomic context

    See Spry1 in Genome Data Viewer
    Location:
    3 B; 3 18.46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (37694096..37698748)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (37639947..37644599)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36412 Neighboring gene RIKEN cDNA 4930594O21 gene Neighboring gene PRELI domain containing 1 pseudogene Neighboring gene predicted gene 42922 Neighboring gene predicted gene, 46799 Neighboring gene STARR-seq mESC enhancer starr_07440 Neighboring gene predicted gene, 42211

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (7)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of ERK1 and ERK2 cascade IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in animal organ development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within bud elongation involved in lung branching IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in epithelial to mesenchymal transition involved in cardiac fibroblast development ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within establishment of mitotic spindle orientation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within metanephros development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within negative regulation of ERK1 and ERK2 cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of ERK1 and ERK2 cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of ERK1 and ERK2 cascade IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in negative regulation of ERK1 and ERK2 cascade IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of GTPase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of MAP kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of MAP kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of Ras protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of Ras protein signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of cell population proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of epithelial to mesenchymal transition IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of fibroblast growth factor receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of fibroblast growth factor receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of fibroblast growth factor receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of lens fiber cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of neurotrophin TRK receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transforming growth factor beta receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within organ induction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within ureteric bud development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within ureteric bud development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein sprouty homolog 1
    Names
    inhibitor of receptor tyrosine kinases
    sprouty homolog 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001305440.1NP_001292369.1  protein sprouty homolog 1

      See identical proteins and their annotated locations for NP_001292369.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1, 2, 3, and 4, encode the same protein.
      Source sequence(s)
      AC110508, AK140405, AV377285, BC051977
      Consensus CDS
      CCDS17322.1
      UniProtKB/Swiss-Prot
      Q9QXV9
      UniProtKB/TrEMBL
      Q53ZU1
      Related
      ENSMUSP00000103744.2, ENSMUST00000108109.8
      Conserved Domains (1) summary
      pfam05210
      Location:181278
      Sprouty; Sprouty protein (Spry)
    2. NM_001305441.1NP_001292370.1  protein sprouty homolog 1

      See identical proteins and their annotated locations for NP_001292370.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an exon in the 5' UTR compared to variant 1. Variants 1, 2, 3, and 4, encode the same protein.
      Source sequence(s)
      AC110508, AK140405, AV377285, BC051977
      Consensus CDS
      CCDS17322.1
      UniProtKB/Swiss-Prot
      Q9QXV9
      UniProtKB/TrEMBL
      Q53ZU1
      Conserved Domains (1) summary
      pfam05210
      Location:181278
      Sprouty; Sprouty protein (Spry)
    3. NM_001305442.1NP_001292371.1  protein sprouty homolog 1

      See identical proteins and their annotated locations for NP_001292371.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) uses an alternate splice site and lacks an exon in the 5' UTR compared to variant 1. Variants 1, 2, 3, and 4, encode the same protein.
      Source sequence(s)
      AC110508, AK140405, AV377285, BC051977
      Consensus CDS
      CCDS17322.1
      UniProtKB/Swiss-Prot
      Q9QXV9
      UniProtKB/TrEMBL
      Q53ZU1
      Conserved Domains (1) summary
      pfam05210
      Location:181278
      Sprouty; Sprouty protein (Spry)
    4. NM_011896.3NP_036026.1  protein sprouty homolog 1

      See identical proteins and their annotated locations for NP_036026.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3, and 4, encode the same protein.
      Source sequence(s)
      AC110508, AK140405, AV377285, BC051977
      Consensus CDS
      CCDS17322.1
      UniProtKB/Swiss-Prot
      Q9QXV9
      UniProtKB/TrEMBL
      Q53ZU1
      Related
      ENSMUSP00000049292.2, ENSMUST00000038569.8
      Conserved Domains (1) summary
      pfam05210
      Location:181278
      Sprouty; Sprouty protein (Spry)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      37694096..37698748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)