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    Lce1a2 late cornified envelope 1A2 [ Mus musculus (house mouse) ]

    Gene ID: 73722, updated on 8-Feb-2024

    Summary

    Official Symbol
    Lce1a2provided by MGI
    Official Full Name
    late cornified envelope 1A2provided by MGI
    Primary source
    MGI:MGI:1920972
    See related
    Ensembl:ENSMUSG00000068890 AllianceGenome:MGI:1920972
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprrl2; 1110004E04Rik
    Summary
    Enables identical protein binding activity. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward stomach adult (RPKM 103.5) See more
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    Genomic context

    See Lce1a2 in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92575920..92577622, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92668613..92670315, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene late cornified envelope 1B Neighboring gene ribosomal protein L13, pseudogene 4 Neighboring gene late cornified envelope 1C Neighboring gene STARR-seq mESC enhancer starr_08313 Neighboring gene late cornified envelope 1D

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General protein information

    Preferred Names
    late cornified envelope 1A2
    Names
    small proline rich-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028625.2NP_082901.1  late cornified envelope 1A2

      See identical proteins and their annotated locations for NP_082901.1

      Status: VALIDATED

      Source sequence(s)
      AK003412
      Consensus CDS
      CCDS17564.1
      UniProtKB/TrEMBL
      Q9D1K4
      Related
      ENSMUSP00000029530.6, ENSMUST00000029530.6

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92575920..92577622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)