U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Hspb2 heat shock protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 69253, updated on 5-Mar-2024

    Summary

    Official Symbol
    Hspb2provided by MGI
    Official Full Name
    heat shock protein 2provided by MGI
    Primary source
    MGI:MGI:1916503
    See related
    Ensembl:ENSMUSG00000038086 AllianceGenome:MGI:1916503
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MKBP; 27kDa; HSP27; 2810021G24Rik
    Summary
    Predicted to be a structural constituent of eye lens. Acts upstream of or within somatic muscle development. Predicted to be located in cytoplasm and nucleus. Is expressed in several structures, including adrenal gland; cardiovascular system; gut; limb segment; and skeletal musculature. Orthologous to human HSPB2 (heat shock protein family B (small) member 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in heart adult (RPKM 66.3), lung adult (RPKM 22.9) and 11 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    9 A5.3; 9 27.75 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (50662372..50663654, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (50751072..50752354, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene DIX domain containing 1 Neighboring gene predicted gene, 39337 Neighboring gene predicted gene, 51674 Neighboring gene STARR-seq mESC enhancer starr_24116 Neighboring gene STARR-seq mESC enhancer starr_24117 Neighboring gene RIKEN cDNA 2310030G06 gene Neighboring gene STARR-seq mESC enhancer starr_24121 Neighboring gene crystallin, alpha B Neighboring gene STARR-positive B cell enhancer ABC_E3828 Neighboring gene cilia and flagella associated protein 68 Neighboring gene ferredoxin-fold anticodon binding domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
     
    enables unfolded protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein refolding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to heat IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within somatic muscle development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    heat shock protein beta-2
    Names
    heat shock 27kD protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164708.1NP_001158180.1  heat shock protein beta-2 isoform 2

      See identical proteins and their annotated locations for NP_001158180.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses a different splice site, compared to variant 1. The resulting protein (isoform 2) is missing an internal segment when it is compared to isoform 1.
      Source sequence(s)
      AK012780, BU704695
      Consensus CDS
      CCDS90564.1
      UniProtKB/Swiss-Prot
      Q99PR8
      Related
      ENSMUSP00000148970.2, ENSMUST00000217159.2
      Conserved Domains (1) summary
      cl00175
      Location:3254
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    2. NM_024441.3NP_077761.3  heat shock protein beta-2 isoform 1

      See identical proteins and their annotated locations for NP_077761.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and it encodes the longer protein (isoform 1).
      Source sequence(s)
      AK012780, BC064051, BU704695
      Consensus CDS
      CCDS23171.1
      UniProtKB/Swiss-Prot
      E9QKE3, Q99PR8, Q9CZC2
      UniProtKB/TrEMBL
      Q6P3C8
      Related
      ENSMUSP00000042374.4, ENSMUST00000042790.5
      Conserved Domains (1) summary
      cl00175
      Location:67148
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      50662372..50663654 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)