U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Nmu neuromedin U [ Mus musculus (house mouse) ]

    Gene ID: 56183, updated on 21-Apr-2024

    Summary

    Official Symbol
    Nmuprovided by MGI
    Official Full Name
    neuromedin Uprovided by MGI
    Primary source
    MGI:MGI:1860476
    See related
    Ensembl:ENSMUSG00000029236 AllianceGenome:MGI:1860476
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable type 1 neuromedin U receptor binding activity and type 2 neuromedin U receptor binding activity. Involved in several processes, including energy homeostasis; regulation of grooming behavior; and temperature homeostasis. Predicted to be located in extracellular region. Predicted to be active in terminal bouton. Is expressed in spinal cord; stomach; and testis. Human ortholog(s) of this gene implicated in obesity. Orthologous to human NMU (neuromedin U). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in stomach adult (RPKM 10.4), colon adult (RPKM 3.1) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    5 C3.3; 5 40.93 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (76481342..76511624, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (76333495..76363777, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_13445 Neighboring gene predicted gene 7467 Neighboring gene RIKEN cDNA 4930432L08 gene Neighboring gene phosducin-like 2 Neighboring gene predicted gene, 34175 Neighboring gene STARR-seq mESC enhancer starr_13446 Neighboring gene STARR-seq mESC enhancer starr_13447 Neighboring gene exocyst complex component 1 like Neighboring gene STARR-positive B cell enhancer ABC_E1053 Neighboring gene exocyst complex component 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (5)  1 citation
    • Endonuclease-mediated (4) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuromedin U receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuromedin U receptor binding ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables type 1 neuromedin U receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables type 2 neuromedin U receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in energy homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in energy homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gastric acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of gastric acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of gastric emptying ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heart rate ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heat generation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of prolactin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of sensory perception of pain ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of stomach fundus smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of synaptic transmission ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of systemic arterial blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of circadian sleep/wake cycle, sleep ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of feeding behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of grooming behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of grooming behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of smooth muscle contraction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in temperature homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in terminal bouton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in terminal bouton ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    neuromedin-U
    Names
    neuromedin U precursor-related peptide/neuromedin U preproprotein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019515.1NP_062388.1  neuromedin-U precursor

      See identical proteins and their annotated locations for NP_062388.1

      Status: PROVISIONAL

      Source sequence(s)
      AF203444
      Consensus CDS
      CCDS19362.1
      UniProtKB/Swiss-Prot
      Q9QXK8
      UniProtKB/TrEMBL
      B7ZNB0, Q059S5
      Related
      ENSMUSP00000031146.3, ENSMUST00000031146.3
      Conserved Domains (1) summary
      pfam02070
      Location:144166
      NMU; Neuromedin U

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      76481342..76511624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)