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    Dkk2 dickkopf WNT signaling pathway inhibitor 2 [ Mus musculus (house mouse) ]

    Gene ID: 56811, updated on 21-Apr-2024

    Summary

    Official Symbol
    Dkk2provided by MGI
    Official Full Name
    dickkopf WNT signaling pathway inhibitor 2provided by MGI
    Primary source
    MGI:MGI:1890663
    See related
    Ensembl:ENSMUSG00000028031 AllianceGenome:MGI:1890663
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables co-receptor binding activity. Involved in negative regulation of Wnt signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including alimentary system; central nervous system; embryo mesenchyme; eye; and genitourinary system. Orthologous to human DKK2 (dickkopf WNT signaling pathway inhibitor 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in limb E14.5 (RPKM 20.3), bladder adult (RPKM 10.5) and 5 other tissues See more
    Orthologs
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    Genomic context

    Location:
    3 G3; 3 61.32 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (131791027..131886065)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (132085266..132180304)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29949 Neighboring gene predicted gene, 22421 Neighboring gene STARR-seq mESC enhancer starr_09013 Neighboring gene STARR-seq mESC enhancer starr_09014 Neighboring gene STARR-seq mESC enhancer starr_09015 Neighboring gene predicted gene, 30147 Neighboring gene STARR-seq mESC enhancer starr_09016 Neighboring gene STARR-seq mESC enhancer starr_09017 Neighboring gene GIMAP family P-loop NTPase domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (5) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables co-receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables co-receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables receptor antagonist activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    dickkopf-related protein 2
    Names
    dickkopf 2
    dickkopf homolog 1
    dickkopf homolog 2
    dkk-2
    mDkk-2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020265.4NP_064661.2  dickkopf-related protein 2 precursor

      See identical proteins and their annotated locations for NP_064661.2

      Status: VALIDATED

      Source sequence(s)
      AC127260
      Consensus CDS
      CCDS17844.1
      UniProtKB/Swiss-Prot
      Q8BFW0, Q9QYZ8
      Related
      ENSMUSP00000029665.6, ENSMUST00000029665.7
      Conserved Domains (1) summary
      pfam04706
      Location:78128
      Dickkopf_N; Dickkopf N-terminal cysteine-rich region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      131791027..131886065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501818.5XP_006501881.1  dickkopf-related protein 2 isoform X1

      Conserved Domains (1) summary
      pfam04706
      Location:91141
      Dickkopf_N; Dickkopf N-terminal cysteine-rich region