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    Fam174a family with sequence similarity 174, member A [ Mus musculus (house mouse) ]

    Gene ID: 67698, updated on 5-Mar-2024

    Summary

    Official Symbol
    Fam174aprovided by MGI
    Official Full Name
    family with sequence similarity 174, member Aprovided by MGI
    Primary source
    MGI:MGI:1914948
    See related
    Ensembl:ENSMUSG00000051185 AllianceGenome:MGI:1914948
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Naa6; Fam174; Tmem157; 2310044D20Rik
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FAM174A (family with sequence similarity 174 member A). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 47.8), ovary adult (RPKM 19.3) and 25 other tissues See more
    Orthologs
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    Genomic context

    Location:
    1 D; 1 47.76 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (95241353..95263009)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (95313628..95335284)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23181 Neighboring gene STARR-seq mESC enhancer starr_01754 Neighboring gene STARR-seq mESC enhancer starr_01755 Neighboring gene predicted gene 5264 Neighboring gene STARR-positive B cell enhancer mm9_chr1:97209938-97210239 Neighboring gene STARR-positive B cell enhancer ABC_E5784 Neighboring gene STARR-positive B cell enhancer ABC_E3292 Neighboring gene STARR-seq mESC enhancer starr_01756 Neighboring gene STARR-seq mESC enhancer starr_01757 Neighboring gene predicted pseudogene 15427 Neighboring gene U7 small nuclear RNA, pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    membrane protein FAM174A
    Names
    transmembrane protein 157

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026321.4NP_080597.2  membrane protein FAM174A precursor

      See identical proteins and their annotated locations for NP_080597.2

      Status: VALIDATED

      Source sequence(s)
      AK033948, AK084861, BB693858
      Consensus CDS
      CCDS35674.1
      UniProtKB/Swiss-Prot
      Q3UF92, Q8CC46, Q8VDR1, Q9D238, Q9D3L0, Q9D6W5, Q9D6Z3
      UniProtKB/TrEMBL
      C9K0Z9
      Related
      ENSMUSP00000057670.7, ENSMUST00000059975.8
      Conserved Domains (1) summary
      pfam06679
      Location:10190
      DUF1180; Protein of unknown function (DUF1180)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      95241353..95263009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)