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    Fundc2 FUN14 domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 67391, updated on 21-Apr-2024

    Summary

    Official Symbol
    Fundc2provided by MGI
    Official Full Name
    FUN14 domain containing 2provided by MGI
    Primary source
    MGI:MGI:1914641
    See related
    Ensembl:ENSMUSG00000031198 AllianceGenome:MGI:1914641
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DC44; HCBP6; 4833415N24Rik
    Summary
    Predicted to be involved in autophagy of mitochondrion. Predicted to be located in mitochondrion. Predicted to be integral component of mitochondrial outer membrane. Orthologous to human FUNDC2 (FUN14 domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in bladder adult (RPKM 12.2), heart adult (RPKM 11.9) and 22 other tissues See more
    Orthologs
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    Genomic context

    Location:
    X A7.3; X 38.22 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (74426005..74440764)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (75382399..75397158)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene coagulation factor VIII Neighboring gene protein phosphatase 4, regulatory subunit 2 pseudogene Neighboring gene predicted gene 8522 Neighboring gene STARR-seq mESC enhancer starr_47381 Neighboring gene STARR-seq mESC enhancer starr_47382 Neighboring gene STARR-positive B cell enhancer ABC_E11683 Neighboring gene C-X9-C motif containing 4 Neighboring gene mature T cell proliferation 1 Neighboring gene BRCA1/BRCA2-containing complex, subunit 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,4,5-trisphosphate binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular triglyceride homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of platelet activation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrial outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    FUN14 domain-containing protein 2
    Names
    hepatitis C virus core-binding protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026126.4NP_080402.3  FUN14 domain-containing protein 2

      See identical proteins and their annotated locations for NP_080402.3

      Status: VALIDATED

      Source sequence(s)
      AL731844, BC061464, BY124891
      Consensus CDS
      CCDS30239.1
      UniProtKB/Swiss-Prot
      Q80VT2, Q80YD9, Q8BSM8, Q9D617, Q9D6K8
      Related
      ENSMUSP00000033541.5, ENSMUST00000033541.5
      Conserved Domains (1) summary
      pfam04930
      Location:49135
      FUN14; FUN14 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      74426005..74440764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)