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    C1qtnf12 C1q and tumor necrosis factor related 12 [ Mus musculus (house mouse) ]

    Gene ID: 67389, updated on 21-Apr-2024

    Summary

    Official Symbol
    C1qtnf12provided by MGI
    Official Full Name
    C1q and tumor necrosis factor related 12provided by MGI
    Primary source
    MGI:MGI:1914639
    See related
    Ensembl:ENSMUSG00000023571 AllianceGenome:MGI:1914639
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C1qdc2; CTRP12; Fam132a; alipolin; 1110035L05Rik
    Summary
    Enables hormone activity. Involved in regulation of glucose import. Acts upstream of or within several processes, including negative regulation of gluconeogenesis; positive regulation of cell communication; and positive regulation of glucose import. Located in extracellular space. Is expressed in cochlea; genitourinary system; liver lobe; thyroid gland; and vibrissa. Orthologous to human C1QTNF12 (C1q and TNF related 12). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in duodenum adult (RPKM 84.1), adrenal adult (RPKM 49.9) and 23 other tissues See more
    Orthologs
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    Genomic context

    Location:
    4 E2; 4 87.66 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (156046769..156051086)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (155962312..155966629)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene sodium channel, nonvoltage-gated 1, delta Neighboring gene STARR-positive B cell enhancer ABC_E10298 Neighboring gene STARR-seq mESC enhancer starr_12277 Neighboring gene ubiquitin-conjugating enzyme E2J 2 Neighboring gene STARR-seq mESC enhancer starr_12278 Neighboring gene predicted gene, 42365 Neighboring gene STARR-seq mESC enhancer starr_12279 Neighboring gene UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 Neighboring gene stromal cell derived factor 4 Neighboring gene tumor necrosis factor receptor superfamily, member 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (4)  1 citation
    • Endonuclease-mediated (3) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of establishment of localization in cell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of gluconeogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of glucose import IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of gluconeogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of gluconeogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of inflammatory response IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of phosphatidylinositol 3-kinase/protein kinase B signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of glucose import IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of glucose import IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of insulin receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of insulin receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of insulin secretion involved in cellular response to glucose stimulus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of glucose import IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within regulation of glucose metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    adipolin
    Names
    C1q domain containing 2
    adipose-derived insulin-sensitizing factor
    complement C1q tumor necrosis factor-related protein 12
    family with sequence similarity 132, member A
    protein FAM132A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026125.3NP_080401.1  adipolin precursor

      See identical proteins and their annotated locations for NP_080401.1

      Status: VALIDATED

      Source sequence(s)
      AK004116, AL627204, CO043709
      Consensus CDS
      CCDS19052.1
      UniProtKB/Swiss-Prot
      Q8R2Z0, Q9CQI8
      Related
      ENSMUSP00000024338.5, ENSMUST00000024338.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      156046769..156051086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)