U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Iqcf4 IQ motif containing F4 [ Mus musculus (house mouse) ]

    Gene ID: 67320, updated on 21-Apr-2024

    Summary

    Official Symbol
    Iqcf4provided by MGI
    Official Full Name
    IQ motif containing F4provided by MGI
    Primary source
    MGI:MGI:1914570
    See related
    Ensembl:ENSMUSG00000041009 AllianceGenome:MGI:1914570
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mtIQ1; 1700042N06Rik
    Summary
    Predicted to enable calmodulin binding activity. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 83.9) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    9 F1; 9 57.8 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (106445518..106448166, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (106568319..106570967, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene IQ motif containing F5 Neighboring gene STARR-positive B cell enhancer mm9_chr9:106434062-106434362 Neighboring gene IQ motif containing F2 Neighboring gene IQ motif containing F3 Neighboring gene STARR-seq mESC enhancer starr_25155 Neighboring gene predicted gene, 39420 Neighboring gene IQ motif containing F6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 
    • Endonuclease-mediated (1) 

    General protein information

    Preferred Names
    IQ motif containing F4
    Names
    testis-specific IQ motif containing protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026090.2NP_080366.2  IQ motif containing F4

      See identical proteins and their annotated locations for NP_080366.2

      Status: PROVISIONAL

      Source sequence(s)
      BC061014
      Consensus CDS
      CCDS23482.1
      UniProtKB/TrEMBL
      Q0P5Z0, Q6P8Y2
      Related
      ENSMUSP00000082192.4, ENSMUST00000085111.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      106445518..106448166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)