Ccdc120 coiled-coil domain containing 120 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Ccdc120provided by MGI
Official Full Name: coiled-coil domain containing 120provided by MGI
Primary source: MGI:MGI:1859619
See related: Ensembl:ENSMUSG00000031150 AllianceGenome:MGI:1859619
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Jm11; Sfc25; DXImx50e
Summary: Predicted to be involved in microtubule anchoring at centrosome and protein localization. Predicted to be located in centriole. Predicted to be part of centriolar subdistal appendage. Is expressed in several structures, including aorta; esophagus; exocrine gland; female reproductive system; and thymus. Orthologous to human CCDC120 (coiled-coil domain containing 120). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in small intestine adult (RPKM 13.6), whole brain E14.5 (RPKM 11.7) and 23 other tissues See more
Orthologs: human all
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Genomic context

Location:: X A1.1; X 3.48 cM

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (7597953..7607563, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (7731714..7741324, complement)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (2)

General gene information

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Markers

DXMit247 (e-PCR), detects polymorphism
- UniSTS:142909

DXImx18 (e-PCR), detects polymorphism
- UniSTS:186202

DXImx30 (e-PCR), detects polymorphism
- UniSTS:186214

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in microtubule anchoring at centrosome	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within multicellular organism development	IEA Inferred from Electronic Annotation more info
involved_in protein localization	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
part_of centriolar subdistal appendage	ISO Inferred from Sequence Orthology more info
located_in centriole	ISO Inferred from Sequence Orthology more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in endosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: coiled-coil domain-containing protein 120

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.