Ss18l2 SS18, nBAF chromatin remodeling complex subunit like 2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Ss18l2provided by MGI
Official Full Name: SS18, nBAF chromatin remodeling complex subunit like 2provided by MGI
Primary source: MGI:MGI:1349474
See related: Ensembl:ENSMUSG00000032526 AllianceGenome:MGI:1349474
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Deb1; 1110020I04Rik
Summary: Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of dendrite morphogenesis and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in bone; cartilage; rib; sensory organ; and submandibular gland primordium. Orthologous to human SS18L2 (SS18 like 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in heart adult (RPKM 32.5), cerebellum adult (RPKM 25.5) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 9 F4; 9 72.56 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	9	NC_000075.7 (121539455..121541987)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	9	NC_000075.6 (121710389..121712921)

Chromosome 9 - NC_000075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables transcription coactivator activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: SS18-like protein 2

Names: Band 47B; differentially expressed in B16F10 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.