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    Trhr thyrotropin releasing hormone receptor [ Mus musculus (house mouse) ]

    Gene ID: 22045, updated on 5-Mar-2024

    Summary

    Official Symbol
    Trhrprovided by MGI
    Official Full Name
    thyrotropin releasing hormone receptorprovided by MGI
    Primary source
    MGI:MGI:98824
    See related
    Ensembl:ENSMUSG00000038760 AllianceGenome:MGI:98824
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TRH-R1
    Summary
    Predicted to enable identical protein binding activity and thyrotropin-releasing hormone receptor activity. Predicted to be involved in phospholipase C-activating G protein-coupled receptor signaling pathway; positive regulation of cytosolic calcium ion concentration; and positive regulation of protein-containing complex assembly. Predicted to act upstream of or within signal transduction. Predicted to be located in cell surface. Is expressed in several structures, including alimentary system; brain; heart; sensory organ; and skeleton. Used to study congenital hypothyroidism. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 7 and hypertension. Orthologous to human TRHR (thyrotropin releasing hormone receptor). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Trhr in Genome Data Viewer
    Location:
    15 B3.2; 15 16.82 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (44059314..44099308)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (44195924..44235912)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38558 Neighboring gene STARR-seq mESC enhancer starr_38559 Neighboring gene SUMO-conjugating enzyme UBC9 pseudogene Neighboring gene transmembrane protein 74 Neighboring gene STARR-seq mESC enhancer starr_38560 Neighboring gene STARR-seq mESC enhancer starr_38561 Neighboring gene STARR-seq mESC enhancer starr_38563 Neighboring gene STARR-seq mESC enhancer starr_38565 Neighboring gene STARR-seq mESC enhancer starr_38567 Neighboring gene predicted gene, 33793 Neighboring gene eukaryotic translation initiation factor 2, subunit 1 alpha pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC124380, MGC124381

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables thyrotropin-releasing hormone receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thyrotropin-releasing hormone receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    thyrotropin-releasing hormone receptor
    Names
    TRH-R
    thyroliberin receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013696.2NP_038724.1  thyrotropin-releasing hormone receptor

      See identical proteins and their annotated locations for NP_038724.1

      Status: VALIDATED

      Source sequence(s)
      AC132870, BB653069, BC128269
      Consensus CDS
      CCDS37068.1
      UniProtKB/Swiss-Prot
      P21761
      UniProtKB/TrEMBL
      Q32MS1, Q3UYL6
      Related
      ENSMUSP00000036320.7, ENSMUST00000038856.14
      Conserved Domains (2) summary
      pfam00001
      Location:42320
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:33165
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      44059314..44099308
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006520748.3XP_006520811.1  thyrotropin-releasing hormone receptor isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:2753
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:26219
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily