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    4930474N05Rik RIKEN cDNA 4930474N05 gene [ Mus musculus (house mouse) ]

    Gene ID: 218921, updated on 8-Feb-2024

    Summary

    Official Symbol
    4930474N05Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930474N05 geneprovided by MGI
    Primary source
    MGI:MGI:3586330
    See related
    Ensembl:ENSMUSG00000096405 AllianceGenome:MGI:3586330
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Acts upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 6.4) See more
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    Genomic context

    Location:
    14 B; 14 20.88 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (35816899..35819358)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (36094942..36097401)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 3F pseudogene Neighboring gene STARR-seq mESC enhancer starr_36412 Neighboring gene predicted gene 7853 Neighboring gene STARR-seq mESC enhancer starr_36413 Neighboring gene predicted gene, 24394 Neighboring gene SET translocation pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within hematopoietic progenitor cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC218921

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175008.3NP_778173.1  uncharacterized protein LOC218921

      See identical proteins and their annotated locations for NP_778173.1

      Status: PREDICTED

      Source sequence(s)
      AC166822
      Consensus CDS
      CCDS49448.1
      UniProtKB/TrEMBL
      Q3V0R1, Q8BVR5
      Related
      ENSMUSP00000153709.2, ENSMUST00000226305.2
      Conserved Domains (1) summary
      cd06224
      Location:77189
      REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      35816899..35819358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518825.2XP_006518888.1  uncharacterized protein LOC218921 isoform X1

      Conserved Domains (1) summary
      cd06224
      Location:77135
      REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...