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    Tcp11l2 t-complex 11 (mouse) like 2 [ Mus musculus (house mouse) ]

    Gene ID: 216198, updated on 5-Mar-2024

    Summary

    Official Symbol
    Tcp11l2provided by MGI
    Official Full Name
    t-complex 11 (mouse) like 2provided by MGI
    Primary source
    MGI:MGI:2444679
    See related
    Ensembl:ENSMUSG00000020034 AllianceGenome:MGI:2444679
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E430026E19Rik
    Summary
    Predicted to be involved in signal transduction. Is expressed in axial skeleton; glans of male genital tubercle; limb; liver lobe; and nervous system. Orthologous to human TCP11L2 (t-complex 11 like 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in heart adult (RPKM 29.5), ovary adult (RPKM 19.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    10 C1; 10 41.55 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (84412811..84450219)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (84576947..84614355)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_27417 Neighboring gene pluripotency associated transcript 7 Neighboring gene STARR-positive B cell enhancer ABC_E3904 Neighboring gene STARR-positive B cell enhancer ABC_E6893 Neighboring gene predicted gene, 34515 Neighboring gene STARR-positive B cell enhancer ABC_E3905 Neighboring gene predicted gene, 25657 Neighboring gene predicted gene, 17249 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC39016

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    T-complex protein 11-like protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146008.2NP_666120.1  T-complex protein 11-like protein 2

      See identical proteins and their annotated locations for NP_666120.1

      Status: PROVISIONAL

      Source sequence(s)
      AC140333
      Consensus CDS
      CCDS36016.1
      UniProtKB/Swiss-Prot
      Q8C2D5, Q8K1H7
      Related
      ENSMUSP00000020223.8, ENSMUST00000020223.8
      Conserved Domains (1) summary
      pfam05794
      Location:77495
      Tcp11; T-complex protein 11

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      84412811..84450219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)