U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Tbxa2r thromboxane A2 receptor [ Mus musculus (house mouse) ]

    Gene ID: 21390, updated on 21-Apr-2024

    Summary

    Official Symbol
    Tbxa2rprovided by MGI
    Official Full Name
    thromboxane A2 receptorprovided by MGI
    Primary source
    MGI:MGI:98496
    See related
    Ensembl:ENSMUSG00000034881 AllianceGenome:MGI:98496
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TP; TXA2-R
    Summary
    This gene encodes a multi-pass membrane protein that functions as a G-protein coupled receptor. The encoded protein binds thromboxane A2, resulting in the aggregation of platelets and constriction of blood vessels. Alternative splicing results in multiple transcript variants for this gene. [provided by RefSeq, Mar 2013]
    Expression
    Biased expression in thymus adult (RPKM 81.0), adrenal adult (RPKM 54.7) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    10 C1; 10 39.72 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81164102..81171008)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81328268..81335174)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma Neighboring gene predicted gene 16315 Neighboring gene cactin, spliceosome C complex subunit Neighboring gene GIPC PDZ domain containing family, member 3 Neighboring gene STARR-positive B cell enhancer ABC_E1809 Neighboring gene high mobility group 20B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (4)  1 citation
    • Endonuclease-mediated (3) 

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC107665

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables thromboxane receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables thromboxane receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to lipopolysaccharide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of cell migration involved in sprouting angiogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of angiogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of blood coagulation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of blood pressure IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of vasoconstriction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of vasoconstriction IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within response to lipopolysaccharide IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in acrosomal vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    thromboxane A2 receptor
    Names
    TXA2 receptor
    prostanoid TP receptor
    thromboxane prostanoid

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277265.1NP_001264194.1  thromboxane A2 receptor

      See identical proteins and their annotated locations for NP_001264194.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR, compared to variant 1. Variants 1-3 encode the same protein.
      Source sequence(s)
      AC155937, AI841195, AK158477
      Consensus CDS
      CCDS24053.1
      UniProtKB/Swiss-Prot
      P30987
      UniProtKB/TrEMBL
      Q5FW61
      Related
      ENSMUSP00000100962.3, ENSMUST00000105325.4
      Conserved Domains (2) summary
      cd14964
      Location:2751
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25317
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. NM_001358512.1NP_001345441.1  thromboxane A2 receptor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1-3 encode the same protein.
      Source sequence(s)
      AC155937, AI841195, AK158477, BC138885
      Consensus CDS
      CCDS24053.1
      UniProtKB/Swiss-Prot
      P30987
      UniProtKB/TrEMBL
      Q5FW61
      Conserved Domains (2) summary
      cd14964
      Location:2751
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25317
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    3. NM_009325.4NP_033351.1  thromboxane A2 receptor

      See identical proteins and their annotated locations for NP_033351.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1-3 encode the same protein.
      Source sequence(s)
      AC155937, AI841195, AK158477, BC138885
      Consensus CDS
      CCDS24053.1
      UniProtKB/Swiss-Prot
      P30987
      UniProtKB/TrEMBL
      Q5FW61
      Related
      ENSMUSP00000151447.2, ENSMUST00000220312.2
      Conserved Domains (2) summary
      cd14964
      Location:2751
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:25317
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      81164102..81171008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)