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    Proser1 proline and serine rich 1 [ Mus musculus (house mouse) ]

    Gene ID: 212127, updated on 5-Mar-2024

    Summary

    Official Symbol
    Proser1provided by MGI
    Official Full Name
    proline and serine rich 1provided by MGI
    Primary source
    MGI:MGI:1919933
    See related
    Ensembl:ENSMUSG00000049504 AllianceGenome:MGI:1919933
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9330161F11; 2810046L04Rik
    Summary
    Orthologous to human PROSER1 (proline and serine rich 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in thymus adult (RPKM 18.3), adrenal adult (RPKM 14.3) and 27 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    3 C; 3 25.17 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (53371216..53389176)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (53463795..53481755)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene 43471 Neighboring gene STARR-seq mESC enhancer starr_07655 Neighboring gene STARR-seq mESC enhancer starr_07656 Neighboring gene NHL repeat containing 3 Neighboring gene predicted gene 16206 Neighboring gene STARR-seq mESC enhancer starr_07657 Neighboring gene stomatin (Epb7.2)-like 3 Neighboring gene predicted gene, 23675

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    proline and serine-rich protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173382.2NP_775558.2  proline and serine-rich protein 1

      See identical proteins and their annotated locations for NP_775558.2

      Status: VALIDATED

      Source sequence(s)
      AC158162
      Consensus CDS
      CCDS17346.1
      UniProtKB/Swiss-Prot
      Q3UGD1, Q5PRE5, Q6PFH9, Q80WX5, Q8BYT2
      Related
      ENSMUSP00000055253.5, ENSMUST00000058577.5
      Conserved Domains (1) summary
      pfam14771
      Location:33121
      DUF4476; Domain of unknown function (DUF4476)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      53371216..53389176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)