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    Glg1 golgi apparatus protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 20340, updated on 21-Apr-2024

    Summary

    Official Symbol
    Glg1provided by MGI
    Official Full Name
    golgi apparatus protein 1provided by MGI
    Primary source
    MGI:MGI:104967
    See related
    Ensembl:ENSMUSG00000003316 AllianceGenome:MGI:104967
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CFR; CFR-1; ESL-1; MG160; Selel; MG-160
    Summary
    Predicted to enable fibroblast growth factor binding activity. Acts upstream of or within several processes, including negative regulation of protein processing; negative regulation of transforming growth factor beta receptor signaling pathway; and regulation of chondrocyte differentiation. Located in Golgi membrane and extracellular matrix. Is expressed in several structures, including cartilage condensation; central nervous system; genitourinary system; hemolymphoid system gland; and retina. Orthologous to human GLG1 (golgi glycoprotein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in ovary adult (RPKM 30.7), adrenal adult (RPKM 22.9) and 28 other tissues See more
    Orthologs
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    Genomic context

    Location:
    8 E1; 8 57.98 cM
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (111879916..111985842, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (111153284..111259210, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 18, member A Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit Neighboring gene RIKEN cDNA 9430091E24 gene Neighboring gene STARR-seq mESC enhancer starr_22692 Neighboring gene STARR-positive B cell enhancer ABC_E708 Neighboring gene predicted gene, 53455 Neighboring gene ring finger and WD repeat domain 3 Neighboring gene STARR-seq mESC enhancer starr_22693 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (3) 
    • Targeted (2)  1 citation
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables fibroblast growth factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables fibroblast growth factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Golgi medial cisterna ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Golgi apparatus protein 1
    Names
    E-selectin ligand 1
    golgi sialoglycoprotein MG-160
    selectin, endothelial cell, ligand

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001368315.1NP_001355244.1  Golgi apparatus protein 1 isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AC093451, AC163625
      UniProtKB/TrEMBL
      F8WHM5
    2. NM_009149.3NP_033175.1  Golgi apparatus protein 1 isoform 2 precursor

      See identical proteins and their annotated locations for NP_033175.1

      Status: VALIDATED

      Source sequence(s)
      AC093451, AC163625
      Consensus CDS
      CCDS22671.1
      UniProtKB/Swiss-Prot
      Q61543, Q9QZ40
      UniProtKB/TrEMBL
      F8WHM5, Q53WR6
      Related
      ENSMUSP00000131355.2, ENSMUST00000169020.8
      Conserved Domains (1) summary
      pfam00839
      Location:796852
      Cys_rich_FGFR; Cysteine rich repeat

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      111879916..111985842 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)