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    Mtmr11 myotubularin related protein 11 [ Mus musculus (house mouse) ]

    Gene ID: 194126, updated on 5-Mar-2024

    Summary

    Official Symbol
    Mtmr11provided by MGI
    Official Full Name
    myotubularin related protein 11provided by MGI
    Primary source
    MGI:MGI:2652817
    See related
    Ensembl:ENSMUSG00000045934 AllianceGenome:MGI:2652817
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cra
    Summary
    Predicted to enable phosphatidylinositol-3-phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be active in cytoplasm and membrane. Orthologous to human MTMR11 (myotubularin related protein 11). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in large intestine adult (RPKM 16.1), kidney adult (RPKM 14.9) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    3 F2.1; 3 41.65 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96069287..96079034)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96161949..96171718)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30044 Neighboring gene OTU domain containing 7B Neighboring gene STARR-positive B cell enhancer ABC_E4561 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:95976180-95976363 Neighboring gene STARR-seq mESC enhancer starr_08407 Neighboring gene splicing factor 3b, subunit 4 Neighboring gene predicted gene, 22027 Neighboring gene synaptic vesicle glycoprotein 2a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Clone Names

    • MGC59008

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myotubularin-related protein 11
    Names
    cisplatin resistance associated
    inactive phosphatidylinositol 3-phosphatase 11

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181409.3NP_852074.2  myotubularin-related protein 11

      See identical proteins and their annotated locations for NP_852074.2

      Status: VALIDATED

      Source sequence(s)
      AK132375, BB203609, BY209090
      Consensus CDS
      CCDS51000.1
      UniProtKB/Swiss-Prot
      Q3V1L6, Q80UV0, Q8CG88
      Related
      ENSMUSP00000062341.10, ENSMUST00000054356.16
      Conserved Domains (3) summary
      pfam12578
      Location:553683
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:51165
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:195469
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96069287..96079034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)