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    Hexim1 hexamethylene bis-acetamide inducible 1 [ Mus musculus (house mouse) ]

    Gene ID: 192231, updated on 21-Apr-2024

    Summary

    Official Symbol
    Hexim1provided by MGI
    Official Full Name
    hexamethylene bis-acetamide inducible 1provided by MGI
    Primary source
    MGI:MGI:2385923
    See related
    Ensembl:ENSMUSG00000048878 AllianceGenome:MGI:2385923
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Clp1; HIS1; CLP-1; 7330426E13Rik
    Summary
    Predicted to enable several functions, including 7SK snRNA binding activity; P-TEFb complex binding activity; and cyclin-dependent protein serine/threonine kinase inhibitor activity. Acts upstream of or within heart development and negative regulation of transcription, DNA-templated. Located in nucleus. Is expressed in several structures, including branchial arch; embryo mesenchyme; heart and pericardium; hindgut dorsal mesentery; and sensory organ. Orthologous to human HEXIM1 (HEXIM P-TEFb complex subunit 1). [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Note: Hexim1 (Gene ID: 192231) and Clp1 (Gene ID: 98985) loci share the Clp1 symbol/alias in common. [08 Feb 2019]
    Orthologs
    NEW
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    Genomic context

    Location:
    11 E1; 11 66.71 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (103007151..103010551)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (103116325..103119725)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene phospholipase C, delta 3 Neighboring gene STARR-seq mESC enhancer starr_30831 Neighboring gene STARR-positive B cell enhancer ABC_E204 Neighboring gene acyl-Coenzyme A binding domain containing 4 Neighboring gene STARR-positive B cell enhancer ABC_E4004 Neighboring gene STARR-positive B cell enhancer ABC_E738 Neighboring gene hexamethylene bis-acetamide inducible 2 Neighboring gene STARR-positive B cell enhancer ABC_E379 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:103003747-103004003 Neighboring gene STARR-positive B cell enhancer ABC_E10717 Neighboring gene predicted gene, 51919

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables 7SK snRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 7SK snRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables P-TEFb complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables cyclin-dependent protein serine/threonine kinase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cyclin-dependent protein serine/threonine kinase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables snRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of 7SK snRNP ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein HEXIM1
    Names
    cardiac lineage protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138753.2NP_620092.1  protein HEXIM1

      See identical proteins and their annotated locations for NP_620092.1

      Status: VALIDATED

      Source sequence(s)
      AL731805
      Consensus CDS
      CCDS25513.1
      UniProtKB/Swiss-Prot
      Q8R409
      Related
      ENSMUSP00000057339.6, ENSMUST00000053063.7
      Conserved Domains (1) summary
      pfam15313
      Location:163295
      HEXIM; Hexamethylene bis-acetamide-inducible protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      103007151..103010551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)