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    Penk preproenkephalin [ Mus musculus (house mouse) ]

    Gene ID: 18619, updated on 21-Apr-2024

    Summary

    Official Symbol
    Penkprovided by MGI
    Official Full Name
    preproenkephalinprovided by MGI
    Primary source
    MGI:MGI:104629
    See related
    Ensembl:ENSMUSG00000045573 AllianceGenome:MGI:104629
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ENK; PPA; Penk1
    Summary
    Predicted to enable opioid receptor binding activity. Acts upstream of or within several processes, including behavioral fear response; sensory perception of pain; and startle response. Predicted to be located in several cellular components, including cell body fiber; perikaryon; and symmetric synapse. Predicted to be active in several cellular components, including axon terminus; dendrite; and neuronal cell body. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Orthologous to human PENK (proenkephalin). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in testis adult (RPKM 34.5), frontal lobe adult (RPKM 32.9) and 16 other tissues See more
    Orthologs
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    Genomic context

    Location:
    4 A1; 4 2.31 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (4133536..4138815, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (4133536..4138815, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene short chain dehydrogenase/reductase family 16C, member 5 Neighboring gene STARR-seq mESC enhancer starr_09431 Neighboring gene predicted gene, 52721 Neighboring gene short chain dehydrogenase/reductase family 16C, member 6 Neighboring gene RIKEN cDNA A830012C17 gene Neighboring gene STARR-seq mESC enhancer starr_09433 Neighboring gene STARR-seq mESC enhancer starr_09434 Neighboring gene STARR-seq mESC enhancer starr_09435 Neighboring gene STARR-seq mESC enhancer starr_09436 Neighboring gene STARR-seq mESC enhancer starr_09437 Neighboring gene STARR-seq mESC enhancer starr_09438 Neighboring gene STARR-seq mESC enhancer starr_09439 Neighboring gene STARR-seq mESC enhancer starr_09440 Neighboring gene predicted gene, 33007

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (6)  1 citation
    • Endonuclease-mediated (5) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables opioid peptide activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables opioid receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables opioid receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables receptor ligand activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled opioid receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within aggressive behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within behavioral fear response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chemical synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within locomotory behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in locomotory exploration behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of behavioral fear response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of long-term synaptic depression IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in sensory perception IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within sensory perception of pain IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within startle response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in synaptic signaling via neuropeptide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in transmission of nerve impulse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in axon ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in axon terminus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in axon terminus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell body fiber ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in dendrite IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in neuronal cell body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in neuronal dense core vesicle lumen ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perikaryon ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in symmetric synapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in synaptic vesicle lumen ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    proenkephalin-A
    Names
    preproenkephalin 1
    spermatogenic-specific proenkephalin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002927.3NP_001002927.1  proenkephalin-A precursor

      See identical proteins and their annotated locations for NP_001002927.1

      Status: VALIDATED

      Source sequence(s)
      BC049766, CX236539
      Consensus CDS
      CCDS17946.1
      UniProtKB/Swiss-Prot
      P22005, Q68G73
      UniProtKB/TrEMBL
      Q3UXY8
      Related
      ENSMUSP00000066822.8, ENSMUST00000070375.8
      Conserved Domains (1) summary
      pfam01160
      Location:2570
      Opiods_neuropep; Vertebrate endogenous opioids neuropeptide
    2. NM_001348209.1NP_001335138.1  proenkephalin-A precursor

      Status: VALIDATED

      Source sequence(s)
      AK135111, AK161272, CX236539
      Consensus CDS
      CCDS17946.1
      UniProtKB/Swiss-Prot
      P22005, Q68G73
      UniProtKB/TrEMBL
      Q3UXY8
      Conserved Domains (1) summary
      pfam01160
      Location:2570
      Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      4133536..4138815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)