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    Neu1 neuraminidase 1 [ Mus musculus (house mouse) ]

    Gene ID: 18010, updated on 21-Apr-2024

    Summary

    Official Symbol
    Neu1provided by MGI
    Official Full Name
    neuraminidase 1provided by MGI
    Primary source
    MGI:MGI:97305
    See related
    Ensembl:ENSMUSG00000007038 AllianceGenome:MGI:97305
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    G9; Apl; Neu; Aglp; Bat7; Bat-7; Map-2; Neu-1
    Summary
    Enables exo-alpha-sialidase activity. Predicted to be involved in several processes, including ganglioside catabolic process; positive regulation of neuron projection development; and regulation of myoblast proliferation. Predicted to act upstream of or within carbohydrate metabolic process and lipid catabolic process. Located in lysosome. Is expressed in alimentary system; brain; intestine; midgut; and midgut loop. Used to study glycoproteinosis. Orthologous to human NEU1 (neuraminidase 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in kidney adult (RPKM 114.3), colon adult (RPKM 62.8) and 20 other tissues See more
    Orthologs
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    Genomic context

    Location:
    17 B1; 17 18.48 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (35150229..35156273)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (34931253..34937297)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene euchromatic histone lysine N-methyltransferase 2 Neighboring gene solute carrier family 44, member 4 Neighboring gene STARR-positive B cell enhancer ABC_E958 Neighboring gene RIKEN cDNA 1110038B12 gene Neighboring gene small nucleolar RNA, C/D box 52 Neighboring gene predicted gene, 25744

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables alpha-sialidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables exo-alpha-(2->3)-sialidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables exo-alpha-(2->6)-sialidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables exo-alpha-(2->8)-sialidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables exo-alpha-sialidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables exo-alpha-sialidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables exo-alpha-sialidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ganglioside catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in oligosaccharide catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in oligosaccharide catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of neuron projection development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of myoblast proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in lysosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sialidase-1
    Names
    G9 sialidase
    HLA-B-associated transcript 7
    N-acetyl-alpha-neuraminidase 1
    lysosomal sialidase
    NP_035023.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010893.3NP_035023.3  sialidase-1 precursor

      See identical proteins and their annotated locations for NP_035023.3

      Status: VALIDATED

      Source sequence(s)
      AK077444, AK138332, AK145680, BY281600, CT025759
      Consensus CDS
      CCDS28668.1
      UniProtKB/Swiss-Prot
      O35657, O55220, Q99KG9
      UniProtKB/TrEMBL
      Q3UL64
      Related
      ENSMUSP00000007253.6, ENSMUST00000007253.6
      Conserved Domains (1) summary
      cd15482
      Location:56404
      Sialidase_non-viral; Non-viral sialidases

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      35150229..35156273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)