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    Gpr83 G protein-coupled receptor 83 [ Mus musculus (house mouse) ]

    Gene ID: 14608, updated on 21-Apr-2024

    Summary

    Official Symbol
    Gpr83provided by MGI
    Official Full Name
    G protein-coupled receptor 83provided by MGI
    Primary source
    MGI:MGI:95712
    See related
    Ensembl:ENSMUSG00000031932 AllianceGenome:MGI:95712
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gir; RP39; RP82; Gpr72; RP105
    Summary
    Predicted to enable neuropeptide receptor activity. Acts upstream of or within response to glucocorticoid. Located in non-motile cilium. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and pectoralis. Orthologous to human GPR83 (G protein-coupled receptor 83). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in cortex adult (RPKM 4.8), frontal lobe adult (RPKM 3.6) and 11 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    9 A2; 9 4.4 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (14771038..14782085)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (14859880..14870789)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_23360 Neighboring gene MRE11A homolog A, double strand break repair nuclease Neighboring gene macrophage migration inhibitory factor, pseudogene 6 Neighboring gene STARR-seq mESC enhancer starr_23361 Neighboring gene IZUMO1 receptor, JUNO Neighboring gene STARR-seq mESC enhancer starr_23362 Neighboring gene coenzyme Q10 homolog B pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (6)  1 citation
    • Endonuclease-mediated (5) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables neuropeptide Y receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuropeptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cilium ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    G-protein coupled receptor 83
    Names
    glucocorticoid-induced receptor
    probable G-protein coupled receptor 83

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310734.1NP_001297663.1  G-protein coupled receptor 83 isoform 2 precursor

      See identical proteins and their annotated locations for NP_001297663.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. It encodes isoform 2, which is shorter than isoform 1.
      Source sequence(s)
      AC136743, AK030359, AK035356, AK041527
      Consensus CDS
      CCDS80959.1
      UniProtKB/TrEMBL
      Q544C4
      Related
      ENSMUSP00000111287.3, ENSMUST00000115624.3
      Conserved Domains (1) summary
      pfam00001
      Location:88303
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    2. NM_010287.3NP_034417.1  G-protein coupled receptor 83 isoform 1 precursor

      See identical proteins and their annotated locations for NP_034417.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AK030359, AK035356, AK041527, AK081276
      Consensus CDS
      CCDS22829.1
      UniProtKB/Swiss-Prot
      P30731, Q542Q9, Q544C4
      UniProtKB/TrEMBL
      Q9EPJ7
      Related
      ENSMUSP00000034408.6, ENSMUST00000034408.12
      Conserved Domains (2) summary
      pfam00001
      Location:88345
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:78225
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      14771038..14782085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030244058.2XP_030099918.1  G-protein coupled receptor 83 isoform X1

      UniProtKB/TrEMBL
      Q9EPJ7
      Conserved Domains (1) summary
      cd15389
      Location:72413
      7tmA_GPR83; G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. XM_006510017.4XP_006510080.1  G-protein coupled receptor 83 isoform X2

      UniProtKB/TrEMBL
      Q9EPJ7
      Conserved Domains (1) summary
      cd15389
      Location:72376
      7tmA_GPR83; G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors